Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2334 ATGGCGTCTGTTCAAGTTATCACAGCCCTTCTCTTTGCATTAGCTCTAGCTAAAATTGACCCCTCAACATGCCAAATGGTTCAGGGAAAAGTCTCTTGCGTTGACTGCACTCACAACTATGATCTATCTGATATTAAGGTTTCAGTGAGGTGTGATGGTGTGAAAAACCTTGCTGTGGCAACTACAGAGAATGATGGCTTCTTCAAGGTTGAGCTTCCCTCAGACCACACAAAACCTTCTGTGAATTGCCTTGCAAAACTTCTTGGTGGGTCAGTTCAGCTTTATGTCTCAAGGAAAAACCAGGTATCCCAAATTATCAAGGACAAAGAGCAAAACAGCTACACCATCTCCACTCCTCTTAGTTTCAGGACATCATGCCCCCAAGACACAAAATGCAAGGGTGGGAAACAGGTTGGTTCATCCAAAACCGTGGATCTTCCTCTGCCTCCAGAGTGGGGCTTGGCACCGAGTAGCTATTATGTTCCTTTCTTCCCCATCATTGGAATACCTTGA 513 0.4503 MASVQVITALLFALALAKIDPSTCQMVQGKVSCVDCTHNYDLSDIKVSVRCDGVKNLAVATTENDGFFKVELPSDHTKPSVNCLAKLLGGSVQLYVSRKNQVSQIIKDKEQNSYTISTPLSFRTSCPQDTKCKGGKQVGSSKTVDLPLPPEWGLAPSSYYVPFFPIIGIP 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2334 170 Pfam Pollen protein Ole e 1 like 27 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2334 Ssu-Chr3 74174134 74174905 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2334 - - gmx:100305605 307.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2334 3 74174134 74174905 Ssu3g2334 3 74174134 74174905 ECH
Ssu8g0699 8 11450293 11452125 Ssu3g2334 3 74174134 74174905 PCT