Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0691 ATGCCCATTATCAGATCAGTAATGGCaacctcttctttcttcttcactttGCTACCGCTTCTCACTATTTCGGATTTGTTTGTGCAAACCCGGGGCCTTAATTTTGGAATCAACTACGGGCAAATAGCCAACAACCTTCCATCTCACTCTCGCGTGGCTGTTCTTGTAAAATCTCTGAATGTCACCAGAATCAAACTCTACGATGCTGATCCAAATGTTCTATCTGCATTCTCCAATTCAGATGTGGAATTCATTATAGGACTTGGGAACGAGGATCTGCAGAGCATGCGAGACCCTTCCAAGGCTCAGAGCTGGATTCAACAGCATGTTCAGCCTTATATTTCTCAAACCAAAATCACTTGCATAAATGTAGGAAATGAGGTCTTCAACAACAATGACACTCAGCTCACAGCAAACCTCCTACCTGCAATGCAAAGTGTGTATAATGCCCTTGTTAATCTAGGACTAGCACAGCAAGTTAGTGTTACAACTGCTCATTCTTTCAACATTTTAGCCACCTCCTTTCCTCCTTCATCTGGTGCTTTCAGGCAAGATCTGATACAATACATTCAGCCCCTCCTTAACTTTCATGCTCAAATCAAGTCACCCTTCCTCATTAATGCATATCCCTTTTTCGCATACAAGGACAACCCAGaccaaatttctttaaattatgtgCTGTTTCAGCCAAATCCAGGGTCCACTGATCCAAATACCAATTTGCATTATGATAACATGTTGTATGCTCAAATTGATGCTGTCTATGCTGCCATCAAAGCACTGGGACATACCGATATTGAAGTCAGGATTTCAGAAACTGGTTGGCCTTCTAAGGGTGACCCTGATGAGGTTGGAGCCACACCACAGAATGCAGAAATTTATAATAGCAATTTGTTGAAGAGGATAGAGCAGAAGCAAGGCACTCCTGCAAATCCATCTGTTCCaattgatatttttgtctttgcaCTTTTCAATGAGGATTTGAAGCCTGGTCCTGTATCAGAGAGAAACTATGGCCTTTATTACCCTGATGGTACCCCGGTTTATAACATTGGCTTAGAAGGTTATCTCCCAGAAATGGTTATAGAGTCCAAATCTAACGCTTTGTCCATCAATTTTCTCGTCTACATTTTTACATGTTTGTTTTTCACTTGGGAGCTTTCAAGACCGTGA 1173 0.3998 MPIIRSVMATSSFFFTLLPLLTISDLFVQTRGLNFGINYGQIANNLPSHSRVAVLVKSLNVTRIKLYDADPNVLSAFSNSDVEFIIGLGNEDLQSMRDPSKAQSWIQQHVQPYISQTKITCINVGNEVFNNNDTQLTANLLPAMQSVYNALVNLGLAQQVSVTTAHSFNILATSFPPSSGAFRQDLIQYIQPLLNFHAQIKSPFLINAYPFFAYKDNPDQISLNYVLFQPNPGSTDPNTNLHYDNMLYAQIDAVYAAIKALGHTDIEVRISETGWPSKGDPDEVGATPQNAEIYNSNLLKRIEQKQGTPANPSVPIDIFVFALFNEDLKPGPVSERNYGLYYPDGTPVYNIGLEGYLPEMVIESKSNALSINFLVYIFTCLFFTWELSRP 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0691 390 Pfam Glycosyl hydrolases family 17 36 351 IPR000490 GO:0004553|GO:0005975
Ssu8g0691 390 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 21 369 IPR044965 GO:0004553|GO:0005975
Ssu8g0691 390 Gene3D Glycosidases 34 356 - -
Ssu8g0691 390 SUPERFAMILY (Trans)glycosidases 35 351 IPR017853 -
Ssu8g0691 390 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 14 21 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0691 Ssu-Chr8 11385431 11387251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0691 85 385 Glycoside Hydrolase AT2G27500 66.225 1.75e-155 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0691 - - gmx:100786020 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0691 8 11385431 11387251 Ssu8g0691 8 11385431 11387251 ECH
Ssu8g0691 8 11385431 11387251 Ssu3g2345 3 74321015 74322761 PCT