Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0673 ATGGAATGGTCCTATATATGGGCATTACATTTAGCCGGCAGTATTGTGTCTTATAGTTTGATTAAGGTTCACTTAGAAATCTTTCTCCCTCTCAATTTATCTCCAATGGAATTGGGAAGCATAATACACTTCCTTCAAGAGAAGACCATTTTAGTCACTGGTGCCACTGGCTTCCTCGCAAAAATTTTTGTGGAAAAAATATTGAGGGTTCAACCAAATGTGAAGAAACTTTATCTTCTTTTGAGAGCCAAAGATACAGAAACTGCCACTCAACGCTTAGACGCTGAGATCATAGGGAAGGACTTATTTAGATTGCTGAAAGAAAAACTGGGTACAAGATTCAATTCCTTTGTCTCAGAAAAGTTGACTGTAGTGCCGGGAGACATCTCTCAAGAGGACTTGAATTTGAAGGACTACATTCTAGGGGAAGAGATTTGCAACCAAACAGATGTTATAGTTAATTTAGCTGCAACAACCAACTTTGATGAAAGATACGATGTTGCATTGGGTATAAATACATTAGGAGTTAAGCATGTGTTGAGCTTCgccaaaaaatgtattaaactaAAGGTGCTTGTCCACGTATCAACAGCTTATGTATGTGGAGAAAGAGAAGGACTCATACTTGAGGATCCACATGACTTTGGTGTGTCACTAAATGGGGTGCCCGGACTAGACATTGatatggaaaagaaaaaggtagagGAGAAATTGAATCAGCTTAGAGAGAAGGGAGCCGCAGAACATGATATTGAATTGGCCATGAAGGACTTGGGTAGTAAAAGAGCAACGATGTATGGATGGCCAAACACGTACGTCTTTACAAAGGCAATGGGAGAAATGCTTGTAGGAACTGCAAAGGGAAATATGAATGTTGTGATTGTACGTCCCACAATCATTACTAGCACTTACAGAGAACCTTTCCCCGGTTGGATCGAAGGTTTAAGAACCATAGACAGCATAGTTGTTGCTTATGGTAAAGGAAAATTAACATGCTTCCTTGCGGATCTTAAGGCAGTTTTTGACGTGATACCGGCTGACATGGTGGTGAATACAATCATAGTGGCCATGGTAGCTCATGCAAATCAACCTAGTGATATTATATATCATGTGGGTTCCTCTGTTATAAATCCAGTTAGGTACCTTAATCTTCGAGACTATAGCTTAAGATATTTCACGGAAAAACCTTGGATAAACAAGGATGGAAAGCCCGTCAAGCTTGACAAAATTACCATATTGAGCAACATGACTAGCTTCCGCAAATATATGTACATTCGTTACCTTCTTCCCTTAAAGGGACTAGAGCTGGTCAATGCAGCTTCATGCCATTATTTTGAGGAAATGTATCTTGACTTCAGTAGGAAGATCCGTACTGTCAGGCGGTTGGTTGAACTTTACAAGCCTTACTTGTTCTTCAATGGGgtATTTGATAATATGAATACAGAAAAGTTATTATCAACGGCAAGACAAGGTGGGGCAGAGACGGAATTGTTTTACTTTGACCCCAAAATGATTGATTGGGAGGACTATTTCATGAATATCCATCTTCCTGGTATCATCAAGTATGCCTTCAAGTGA 1578 0.3878 MEWSYIWALHLAGSIVSYSLIKVHLEIFLPLNLSPMELGSIIHFLQEKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAKDTETATQRLDAEIIGKDLFRLLKEKLGTRFNSFVSEKLTVVPGDISQEDLNLKDYILGEEICNQTDVIVNLAATTNFDERYDVALGINTLGVKHVLSFAKKCIKLKVLVHVSTAYVCGEREGLILEDPHDFGVSLNGVPGLDIDMEKKKVEEKLNQLREKGAAEHDIELAMKDLGSKRATMYGWPNTYVFTKAMGEMLVGTAKGNMNVVIVRPTIITSTYREPFPGWIEGLRTIDSIVVAYGKGKLTCFLADLKAVFDVIPADMVVNTIIVAMVAHANQPSDIIYHVGSSVINPVRYLNLRDYSLRYFTEKPWINKDGKPVKLDKITILSNMTSFRKYMYIRYLLPLKGLELVNAASCHYFEEMYLDFSRKIRTVRRLVELYKPYLFFNGVFDNMNTEKLLSTARQGGAETELFYFDPKMIDWEDYFMNIHLPGIIKYAFK 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0673 525 CDD FAR_C 425 524 IPR033640 -
Ssu8g0673 525 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 41 373 IPR036291 -
Ssu8g0673 525 CDD FAR-N_SDR_e 48 396 - -
Ssu8g0673 525 Gene3D - 43 411 - -
Ssu8g0673 525 PANTHER MALE STERILITY PROTEIN 2-RELATED 37 523 IPR026055 GO:0080019
Ssu8g0673 525 Pfam Male sterility protein 52 353 IPR013120 -
Ssu8g0673 525 Pfam Male sterility protein 426 525 IPR033640 -
Ssu8g0673 525 PANTHER FATTY ACYL-COA REDUCTASE 37 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0673 Ssu-Chr8 11056465 11060912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0673 145 524 Acyl Lipid Metabolism Gene Families AT4G33790 62.368 9.31e-179 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0673 K13356 - gmx:100805240 915.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0673 8 11056465 11060912 Ssu3g2367 3 74684443 74686099 PCT