Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2367 ATGAAAGACTTGGGTATGAAAAGAGCAACTTTATATGGATGGCCAAACACATATGTCTTTACAAAGGCAATGGGAGAAATGCTTGTAGAAACTCTGAAGGAGAACATGTCCGTTGTTATTGTACGTCCTACAATCGTTACCAGCACTTACAGAGAACCTTTCCCTGGGTGGGTCGAAGGAGTAAGAACCATAGATAGTTTCATTGTTGCTTATGGCAAAGGAAAATTAACATGCCTCCTTGCAGACATCAAGGCTGTTTTTGATGTGATACCAGCAGACATGGTGGTGAATGCAATAATAACGGCCATGGTGGCTCATGCAAATCAGCCTTGTgataatatcatatatcatGTGGGTTCCTCTATTACAAATCCAATTAGATACAACAATCTCAAAGACTATTGCTTTAGATATTTCAAGGCAAAACCATGGATAAACAAGGAAGGAATGTCTGTCAAGGTTGGCAAAGTTACAGTATTGGACAGCATGAATAGCTTCCAGAGATACATGTTCATCCGTTACTTGCTTCCATTAAAGGGACTAGAGCTAGCCAATGCTACATTTTGCCAATATGTTCAGGGGATGTATCTTGACATCAGAAGGAAGATCAATATAGTGATGCGTTTGGTTGACCTTTACAAGCCCTACTTGTTCTTCAATGGCGtATTTGACAATATGAACACACAAAAGTTGCAAATAGCGGCAAGACAAGGTGGGGTGGAGATGGAATATCTGTTTTACTTTGACCCCAAAATGATTGATTGGGAGGACTACTTCATGAATATCCATATTCCTGGTATTGTCAAGTATGTCTTCAAGTGA 822 0.3929 MKDLGMKRATLYGWPNTYVFTKAMGEMLVETLKENMSVVIVRPTIVTSTYREPFPGWVEGVRTIDSFIVAYGKGKLTCLLADIKAVFDVIPADMVVNAIITAMVAHANQPCDNIIYHVGSSITNPIRYNNLKDYCFRYFKAKPWINKEGMSVKVGKVTVLDSMNSFQRYMFIRYLLPLKGLELANATFCQYVQGMYLDIRRKINIVMRLVDLYKPYLFFNGVFDNMNTQKLQIAARQGGVEMEYLFYFDPKMIDWEDYFMNIHIPGIVKYVFK 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2367 273 Gene3D - 2 168 - -
Ssu3g2367 273 PANTHER FATTY ACYL-COA REDUCTASE 1 272 - -
Ssu3g2367 273 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 146 IPR036291 -
Ssu3g2367 273 CDD FAR_C 172 272 IPR033640 -
Ssu3g2367 273 Pfam Male sterility protein 174 273 IPR033640 -
Ssu3g2367 273 PANTHER MALE STERILITY PROTEIN 2-RELATED 1 272 IPR026055 GO:0080019
Ssu3g2367 273 Pfam Male sterility protein 1 99 IPR013120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2367 Ssu-Chr3 74684443 74686099 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2367 1 272 Acyl Lipid Metabolism Gene Families AT4G33790 59.191 1.58e-123 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2367 K13356 - gmx:100793197 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2367 3 74684443 74686099 Ssu3g2367 3 74684443 74686099 ECH
Ssu8g0673 8 11056465 11060912 Ssu3g2367 3 74684443 74686099 PCT