Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0661 ATGAATATGTCAGATATAATATCTTGTTTCAACGAGAACGCAGTGAACGTGTCACACTCCTCGTGTTCTAGCTACTCAAACAACGCTTGCGTATCTCCAAGTGTAACACCACCTTCAACCCAAAACTCGGTCTCCTCGGTCTACAAAACAACCCTCTCCAACCAAAAGCAGCTTCTGATCACAGTCACGTGGTGCAAGAGCCACTCCAACCAAGGACTCACCATAACCTTCGGCGAAGACAACCAGTCAGCACCATCCTTCAGACTCAACACCAATTCACGCTTTTTCGGAAAGAAGAAAGGGAGCAAAGTCCTGGAATCCAAAGACTCAAAGGTCGAAGTCTTCTGGGACCTCTCGAAGGCCAAGTATGACACTGGCCCCGAACCCGTTCAAGGGTTTTACGTGGCAATTCTCGTTGACGCAGAAATAGGCCTCGTTCTGGGCGAAGAAGACGTGGCCAAGAGGTTCAAAACGAGAACGCTTGTGGCTAGCGTGTCGCTCTTATCACGGCGCGAGCATTGCTCGGGTAACGCCGTTTACGCCACCAAGGCTCAGTTCTGCGACACTGGCACTTGGCACGACATTTTGATCAGATGCAGTGGGGAGAATGAGGGCCTCAAGTCTCCTGGTTTGTCCGTCTGCATTGATAAGAAGACCGTGATTCGCGTGAAGAGGCTTCAGTGGAATTTTAGGGGCAACCAAACGATTTTCGTGGATGGGTTGCTGGTGGATTTGCTTTGGGATGTTCATAACTGGTTTTTCAACCCTGCTTCTGGGTATGCGGTGTTCATGTTCAGGACTAGGAGTGGCTTGGATAGCAGATTGTGGTTGGAGGAGAAGTTGGTGCAGAAAGATAAAGATAGAGTTGAATTCTCCTTGTTGATCTATGCCTGTAAGAGCACATGA 906 0.4901 MNMSDIISCFNENAVNVSHSSCSSYSNNACVSPSVTPPSTQNSVSSVYKTTLSNQKQLLITVTWCKSHSNQGLTITFGEDNQSAPSFRLNTNSRFFGKKKGSKVLESKDSKVEVFWDLSKAKYDTGPEPVQGFYVAILVDAEIGLVLGEEDVAKRFKTRTLVASVSLLSRREHCSGNAVYATKAQFCDTGTWHDILIRCSGENEGLKSPGLSVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHNWFFNPASGYAVFMFRTRSGLDSRLWLEEKLVQKDKDRVEFSLLIYACKST 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0661 301 Pfam Plant protein of unknown function (DUF868) 39 299 IPR008586 -
Ssu8g0661 301 PANTHER EXPRESSED PROTEIN 3 300 IPR008586 -
Ssu8g0661 301 PANTHER DUF868 FAMILY PROTEIN 3 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0661 Ssu-Chr8 10900185 10901090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0661 3 300 EF-hand Containing Proteins AT5G28150 39.474 8.66e-60 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0661 - - gmx:100798692 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0661 8 10900185 10901090 Ssu8g0661 8 10900185 10901090 ECH
Ssu8g0661 8 10900185 10901090 Ssu3g2385 3 75055163 75056116 PCT