Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0659 ATGTCCGATTCCGAAACCAAAACCCGACACCGTCCGGGGCCCTGGCCGCCGGCGCCGGAGGCCAAGGCAATGCCGCCTTCTTCCTGGGCCAAGAAAACGGGCTTCCAGCCCAAGTTCTCCGGCGAGGCCAATGCCAGCGACTCGGGCCAGATAAGCCTGCAGCCCAGGCCCAAGGAGCCGGACACCAACGTGGATCTCGAAGCGGGCCGGGCCCGGACCCCGGCGAACGGCAGTGGCCCACCGCGAGAAGGTTCCGCTCCGCCGCTTCCGCCGCCGTCCAAGGATCAGATGGTGAAGAAGCGCAGGGACTCCGACGGGGTTCCCAAGAGTTCCATTCCCAGCACCAATGGCCAAGCGACGGCGGAGCCGctgccgccgccgccgccgcggCGAACGGCGAGGCACGAGGAAGTGGTGGACGCGCCGCCGCAGAGCGTGGATGAAGATGGGTTCGTGTCGAGGCATTCGCATATGAAGTATGAGCTCAGAGATTCACCAGGTTTAgTTCCCATTGGTGTGTACGGTATTCAGCATTACGTTTCGATATTGGGGTCGTTGATTCTCACTCCGCTCGTTATAGTTCCGGCAATGGGAGGCTCTCATGAGGATACTTCTGCGGTGGTGTCAACTGTGCTCTTTGTGTCGGGAGTGACTACACTCTTGCATACAAGTTTTGGGTCGAGGTTGCCCTTGATACAGGGGCCTTCTTTTGTTTATCTGGCTCCGGCATTGGCGATCATCAACTCCCCCGAGTTTCAAGGATTAAATGGAAatAAATTCAAACATATAATGAAGGAGCTGCAGGGGGCTATAATTATTGGATCGGCTTTTCAGACTTTCCTTGGATATACTGGACTTATGTCATTGTTAGTAAGGTTGATCAATCCTGTGGTTGTATCCCCAACTATTGCTGCAGTTGGACTTTCATTTTACAGTTATGGTTTTCCGCTAGTTGGTACATGTCTCGAGATTGGTGCAGTGCAGATATTagtggtttttgttttttctcttTATCTTCGTAAGATATCTGTTCTTGGACACCGCATATTTCTAATATATGCAGTTCCTTTGGGTCTGGCAATTACTTGGGCAGTTGCTTTCTTGCTGACTGAAGCTGGAGTCTACAACTACAAAGGGTGTGACATAAATATACCCGCCTCAAATATGGTTTCCGAGCACTGCAGAAAGCATGTCTCAAGGATGAAGCATTGTCGAGTTGATACTTCTCATGCATTGAAATCATCCCCGTGGTTTAGATTTCCTTATCCATTACAATGGGGTACTCCTATCTTCCACTGGAAAATGGCTCTTGTGATGTGCGTGGTTTCCTTAATCTCATCTGTGGATTCGgttGGTTCGTATCATGCATCTTCATTATTGGTAGCATCCAGACCTCCAACTCCCGGAGTTCTTAGTCGAGGAATTGGTTTGGAAGGTCTTTCTAGTGTCTTGGCTGGTCTCTGGGGAACTGGAACAGGGTCTACTACCTTAACTgaaaatattcatacaattgCTGTAACTAAAATGGGAAGCCGCAGAGCAGTTCAATTGGGTGCATGCTTTCTGATAGTGTTGTCTCTCGTGGGTAAGGTGGGAGGGTTCATTGCTTCAATTCCTGAAGTCATGGTTGCTGGTCTCCTATGCTTTATGTGGGCAATGCTTACAGCATTGGGCTTGTCAAATCTACGCTATAGTGAGGCTGGAAGCTCTCGCAACATCATCATAATTGGGTTATCATTGTTCTTCTCTCTTTCCATACCTGCCTACTTTCAACAATACGGCATCTCTCCAAATTCTAACTTGTCAGTGCCAAGTTATTTTCAACCCTACATTGTGGCTTCTCATGGGCCTTTCCGCAGCAAATATGGAGGGTTAAACTATTTCCTGAACACAATCTTTTCACTACACATGGTGATAGCTTTTGTTGTCGCTGTTATCTTGGATAATACTGTGCCTGGCAGTAAGCAGGAACGTGGGGTATACGTTTGGTCCGAACCTGAGGCTGCTAGAAGGGAACCTGCTGTTGCTAATGACTATGAGTTGCCCTTGAGAGTTGGTCGGATTTTCAGATGGGTGAAGTGGGTTGGCTTGTGA 2094 0.479 MSDSETKTRHRPGPWPPAPEAKAMPPSSWAKKTGFQPKFSGEANASDSGQISLQPRPKEPDTNVDLEAGRARTPANGSGPPREGSAPPLPPPSKDQMVKKRRDSDGVPKSSIPSTNGQATAEPLPPPPPRRTARHEEVVDAPPQSVDEDGFVSRHSHMKYELRDSPGLVPIGVYGIQHYVSILGSLILTPLVIVPAMGGSHEDTSAVVSTVLFVSGVTTLLHTSFGSRLPLIQGPSFVYLAPALAIINSPEFQGLNGNKFKHIMKELQGAIIIGSAFQTFLGYTGLMSLLVRLINPVVVSPTIAAVGLSFYSYGFPLVGTCLEIGAVQILVVFVFSLYLRKISVLGHRIFLIYAVPLGLAITWAVAFLLTEAGVYNYKGCDINIPASNMVSEHCRKHVSRMKHCRVDTSHALKSSPWFRFPYPLQWGTPIFHWKMALVMCVVSLISSVDSVGSYHASSLLVASRPPTPGVLSRGIGLEGLSSVLAGLWGTGTGSTTLTENIHTIAVTKMGSRRAVQLGACFLIVLSLVGKVGGFIASIPEVMVAGLLCFMWAMLTALGLSNLRYSEAGSSRNIIIIGLSLFFSLSIPAYFQQYGISPNSNLSVPSYFQPYIVASHGPFRSKYGGLNYFLNTIFSLHMVIAFVVAVILDNTVPGSKQERGVYVWSEPEAARREPAVANDYELPLRVGRIFRWVKWVGL 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0659 697 MobiDBLite consensus disorder prediction 39 57 - -
Ssu8g0659 697 Pfam Permease family 173 590 IPR006043 GO:0016020|GO:0022857|GO:0055085
Ssu8g0659 697 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 27 697 - -
Ssu8g0659 697 MobiDBLite consensus disorder prediction 1 150 - -
Ssu8g0659 697 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 27 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0659 Ssu-Chr8 10859431 10865371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0659 20 697 Organic Solute Cotransporters AT2G27810 71.667 0.0 978
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0659 - - gmx:100780211 1253.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0659 8 10859431 10865371 Ssu8g0659 8 10859431 10865371 ECH
Ssu8g0659 8 10859431 10865371 Ssu3g2389 3 75081637 75102675 PCT