Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2389 ATGTCCAATTCCGATCCGAACAACCGCAACCGCCAGGCTTCCTCGCCGCCGGAGCCCAAGCCAGTGCCACCTTCTTCTTGGGCCAAGAAAACGGGCTTCAAGCCCAAATTCTCCGGCGAGACCAATGCCGGCGACTCCGGCCCGATAACCACGCCACCGCCCAAGCCCAGGGAGCCCGAGCCCAACCTCGATCTCGAGGCCGGTCGAGTTCGAACTCCCGCAACCACTAACGGCGTCGCTCCTGGCGACAAGGCTCCCGCTCCGGTTCCGCCACCGCCGGCGATGGCGAAGAAGCGGAGAGACTTCGAGGGCGTTCCGAAGAGTTCGGTTCCCAGCACCAACGGCCAGGCGCCGGCGGCGGAGCAGCCGCGGCGAACGGCGAGGCACGAGGAAGTGGTGGACGGCTTGCCGGTGGATAACGACGGGTTTGTGTCGCGGCACTCGCATATGAAGTACGATCTCAGAGATTCACCCGGTCTAGTTCCTATTGGAGTGTACGGTATGCAGCACTACGTTTCTATATTAGGTTCGTTGGTTCTGATTCCGCTTGTGATTGTTCCTGCCATGGGAGGCACTCATGAGGAAACTTCTATGGTGGTATCGACCGTGCTGTTTGTCTCGGGGGTGACTACTCTCTTGCATATTGCTTTTGGGTCCAGGTTGCCCTTGATTCAGGGCCCTTCTTTTGTTTATCTGGCACCGGCGCTCGCAATAATCAACTCCCCGGAGTTTCAAGGATTGAATGGAAATaaattcaagcaTATAATGAGGGAGCTCCAAGGGGCTATAATTATTGGATCAGCTTTTCAAGGTTTACTTGGATATACTGGACTTATGTCACTGTTAGCAAGGTTGATCAATCCCGTCATTGTATCCCCAACTATTGCTGCAGTTGGACTTTCATTCTATAGTTATGGTTTCCCATTAGTTGGTACATGTATTGAGATCGGTGCAGTACAAATATTAGTGGTTAttgttttttctcttTATCTTCGTAAGATATCTGTTCTTGGACATCGCATATTTCTAATATATGCAGTTCCTCTGGGTCTGGCGATTACATGGGCATTTGCTTTCTTGCTGACTGAAACAGGAGCTTACAGCTACAAAGGGTGTGATATAAATATACCTGCCTCAAATATGGTCTCAGAGCACTGCAGAAAGCATTTTTCAAGGATGAGGCATTGTCGGGTTGATACTTCTCAAGCATTGAAATCCTCTCCATGGTTTAGGTTTCCTTATCCACTACAATGGGGTACTCCCGTCTTCCACTGGAAAATGGCTCTTGTAATGTGTGTGGTTTCCTTAATCTCAACTGTGGATTCGGTTGGCTCATACCATGCATCTTCATTATTGGTAGCATCCAGACCACCAACTCTCGGAGTTCTTAGTCGAGGAATTGGTTTGGAAGGTCTTTCTAGTGTCTTGGCTGGTCTCTGGGGAACTGGAACTGGATCTACAACTCTAACTGAAAATGTTCACACAATTGCTGTGACTAAAATGGGAAGCCGCAGGGCAGTTCAACTCGGGGCATGCTTTCTGATAGTATTGTCTCTTGTGGGTAAGGTTGGAGGATTCATTGCTTCAATTCCTGAAGTCATGGTTGCTGGTCTCCTCTGCTTTATGTGGGCAATGCTCACAGCATTGGGCTTGTCAAATCTACGCTATAGTGAGGCTGGAAGCTCTCGCAATATCATCATAGTTGGGCTAtcattgtttttctctctttccataCCTGCCTACTTTCAACAATATGGCATCTCTCCGAATTCCAACTTGTCTGTGCCAAGTTATTTTCAGCCCTACACTGTGGCTTCTCATGGGCCTTTCCACAGCAAATATGGAGGGTTGAACTATGTCTTGAACACACTTTTTTCACTACACATGGTGATAGCGTTTCTTGTCGCTGTTATCCTGGATAATACTGTACCTGGCAGTAAGCAGGAACGTGGGGTATATGTTTGGTCCGAAGCCGAGGTTGCTAGAAGAGAGCCTGCTGTTGCTAAAGACTATGAGTTGCCCTGGACAGTTGGTCGGATTTTCAGATGGGTGAAGTGGGTTGGCCTGTAA 2070 0.4836 MSNSDPNNRNRQASSPPEPKPVPPSSWAKKTGFKPKFSGETNAGDSGPITTPPPKPREPEPNLDLEAGRVRTPATTNGVAPGDKAPAPVPPPPAMAKKRRDFEGVPKSSVPSTNGQAPAAEQPRRTARHEEVVDGLPVDNDGFVSRHSHMKYDLRDSPGLVPIGVYGMQHYVSILGSLVLIPLVIVPAMGGTHEETSMVVSTVLFVSGVTTLLHIAFGSRLPLIQGPSFVYLAPALAIINSPEFQGLNGNKFKHIMRELQGAIIIGSAFQGLLGYTGLMSLLARLINPVIVSPTIAAVGLSFYSYGFPLVGTCIEIGAVQILVVIVFSLYLRKISVLGHRIFLIYAVPLGLAITWAFAFLLTETGAYSYKGCDINIPASNMVSEHCRKHFSRMRHCRVDTSQALKSSPWFRFPYPLQWGTPVFHWKMALVMCVVSLISTVDSVGSYHASSLLVASRPPTLGVLSRGIGLEGLSSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVQLGACFLIVLSLVGKVGGFIASIPEVMVAGLLCFMWAMLTALGLSNLRYSEAGSSRNIIIVGLSLFFSLSIPAYFQQYGISPNSNLSVPSYFQPYTVASHGPFHSKYGGLNYVLNTLFSLHMVIAFLVAVILDNTVPGSKQERGVYVWSEAEVARREPAVAKDYELPWTVGRIFRWVKWVGL 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2389 689 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 25 689 - -
Ssu3g2389 689 MobiDBLite consensus disorder prediction 1 15 - -
Ssu3g2389 689 MobiDBLite consensus disorder prediction 1 130 - -
Ssu3g2389 689 Pfam Permease family 165 582 IPR006043 GO:0016020|GO:0022857|GO:0055085
Ssu3g2389 689 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 25 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2389 Ssu-Chr3 75081637 75102675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2389 18 689 Organic Solute Cotransporters AT2G27810 70.432 0.0 948
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2389 - - gmx:100799537 1207.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0659 8 10859431 10865371 Ssu3g2389 3 75081637 75102675 PCT