Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0658 ATGCAGACTCTTTCGCCCCCCACTTCCAACGCGCTCAATCTCAAGCACGTTCTGCGCCCGCTAGTCTCGCACAATCGGCTCGGCTCTGGCCGAGTCTCGGTGAAATGCGCTTTCGCGTTCGAACCGGCGAGCTACGGAATCGGCTCGAGCCGCGCCGAATGGCAGAGCTCCTGCGCCATCTTAGCCAGCAAGGTCGTGTCTCAGGAACAATCCTCCACTGACCAGAACAACAACGGCGGCACCGCCAACCACGTCGCCGCCGTCAACGGCCACAAGGCGGCCGTGAGCGACCTCAAGCTCGTTCCCATCGGAAGCCTCGGCGAAGCGGAGAACAACAACAAGCCGCTCCCGCCGAAGCCGCTGACAATCTCCGACCTCTCGCCGGCGCCGATGCACGGCTCGAAGCTCCGCGTGGCGTACCAAGGCGTTCCCGGCGCGTACTCCGAGGCCGCCGCCGGCAAGGCCTATCCGAACTGCGAGGCCATTCCGTGCGACCAGTTCGAGGTGGCGTTCCAGGCGGTGGAGCTCTGGATCGCCGACAGAGCCGTTCTCCCGGTGGAAAACTCCCTCGGCGGCTCGATCCACCGGAACTACgacctcctcctccgccaccgCCTCCACATCGTCGGCGAGGTCCAGCTCCCGGTCCACCACTGCCTCCTCGCGCTCCCCGGCGTAAGGAAGGAGTTCCTCACGCGCGTGATTTCGCATCCGCAGGCACTCGCGCAGTGCGAGCACACGCTCACCAAGCTCGGCCTCAACGTCGTGCGCGAGGCCGTAGACGACACCGCCGGCGCCGCCGAGTTCGTCGCCACCAACGACCTCCGCGACACCGCCGCCATCGCGAGCGCACGCGCGGCGGAGCTCTACGGCCTGCAGGTGATGGCGGACGGAATCCAAGACGATCCGAGCAACGTCACGCGATTCGTTATGCTCGCGCGAGAGCCTATTATTCCGCGCACGGACCGTCCTTTCAAGACGAGCATTGTTTTCGCGCACGACAAGGGAACCTCGGTGCTCTTCAAGGTGCTTTCCTGCGTTTGCGTTTCGGAACATCAGTTTGACGAAGATCGAGTCGCGGCCGCACCGGAACCGTCCGATTCGGCTCGTTGA 1113 0.6334 MQTLSPPTSNALNLKHVLRPLVSHNRLGSGRVSVKCAFAFEPASYGIGSSRAEWQSSCAILASKVVSQEQSSTDQNNNGGTANHVAAVNGHKAAVSDLKLVPIGSLGEAENNNKPLPPKPLTISDLSPAPMHGSKLRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEFLTRVISHPQALAQCEHTLTKLGLNVVREAVDDTAGAAEFVATNDLRDTAAIASARAAELYGLQVMADGIQDDPSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSCVCVSEHQFDEDRVAAAPEPSDSAR 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0658 370 Pfam Prephenate dehydratase 138 316 IPR001086 GO:0004664|GO:0009094
Ssu8g0658 370 Gene3D - 132 220 - -
Ssu8g0658 370 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 26 348 - -
Ssu8g0658 370 Gene3D - 221 302 - -
Ssu8g0658 370 ProSiteProfiles Prephenate dehydratase domain profile. 137 314 IPR001086 GO:0004664|GO:0009094
Ssu8g0658 370 SUPERFAMILY Periplasmic binding protein-like II 137 320 - -
Ssu8g0658 370 CDD PBP2_Ct-PDT_like 135 316 - -
Ssu8g0658 370 PANTHER AROGENATE DEHYDRATASE 26 348 - -
Ssu8g0658 370 ProSitePatterns Prephenate dehydratase signature 1. 290 312 IPR018528 GO:0004664|GO:0009094
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0658 Ssu-Chr8 10823288 10824400 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0658 K05359 - gmx:100797636 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0658 8 10823288 10824400 Ssu8g0658 8 10823288 10824400 ECH
Ssu8g0658 8 10823288 10824400 Ssu3g2390 3 75124174 75125424 PCT