Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0642 ATGGGGTATTCAAGTTATTTCTTGACTTCATTGTTTCTGGTTGTAGTGTTCAATGTGGCTAAAGCACAGCCTCTGGTCCCTGCATTGTTCATATTTGGGGACTCTGTGGTTGATGTGGGCAATAATAACCACTTGTACACCATTGTTAAAGCAAACTTCCCTCCTTATGGAAGAGACTTCAAGAATCACAAGCCAACAGGGAGGTTTTGCAATGGAAAGCTTGCATCAGACTACACAGCTGAAAACCTCGGATTTACCTCTTACCCACCAGCCTACCTCAACTTAAAGGCCAAAGGAAAGAACCTCTTGAATGGTGCCAACTTTGCCTCAGCTGCTTCTGGCTACTATGATTCCACAGCCAAGCTATATCATGCAATTCCATTGAGCCAGCAACTGGAACACTACAAAGAGTGCCAGAATATATTGGTGGGAACAGTAGGGCAGTCTAATGCTTCATCAATAATATCTGGTGCTATATATCTTATCAGTGCTGGAAACAGTGACTTTATTCAGAACTATTATATAAATCCACTGCTTTACAAGGTTTACACTGCTGATCAATTCTCTGACATTCTCATGCAACGCTATGCCACTTTCATTCAGAATTTATACGCACTTGGAGTAAGGAAGATTGGTGTGACAACATTACCTCCAATGGGTTGTCTGCCAGCAGCCATCACTCTCTTTGGCTCTGATAGCAACCAATGCGTGGCAAAACTAAACAATGATGCAGTTAACTTCAATGAAAAGCTGAACACCACATCTCAGAGCTTGCAAAAATCGCTTTCTGGTCTCAAATTGGTCATCCTTGATATCTACCAACCTCTCTATGACCTTGTCACCAAGCCTTCTGAAAATGGATTTTTTGAAACAAGGAAGGCTTGTTGTGGAACAGGCTTGCTAGAGACATCTATATTGTGCAATCAGGAGTCCATAGGAACATGTGCCAATGCATCTGAATATGTATTCTGGGATGGTTTTCATCCCTCTGACGCTGCAAACAAGGTTTTGTCCGATGATTTACTGGCTGCTGGCATCTCTCTCATATCTTAA 1053 0.4217 MGYSSYFLTSLFLVVVFNVAKAQPLVPALFIFGDSVVDVGNNNHLYTIVKANFPPYGRDFKNHKPTGRFCNGKLASDYTAENLGFTSYPPAYLNLKAKGKNLLNGANFASAASGYYDSTAKLYHAIPLSQQLEHYKECQNILVGTVGQSNASSIISGAIYLISAGNSDFIQNYYINPLLYKVYTADQFSDILMQRYATFIQNLYALGVRKIGVTTLPPMGCLPAAITLFGSDSNQCVAKLNNDAVNFNEKLNTTSQSLQKSLSGLKLVILDIYQPLYDLVTKPSENGFFETRKACCGTGLLETSILCNQESIGTCANASEYVFWDGFHPSDAANKVLSDDLLAAGISLIS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0642 350 Gene3D SGNH hydrolase 16 346 IPR036514 -
Ssu8g0642 350 PANTHER GDSL ESTERASE/LIPASE EXL3 9 349 - -
Ssu8g0642 350 SUPERFAMILY SGNH hydrolase 29 341 - -
Ssu8g0642 350 CDD SGNH_plant_lipase_like 27 342 IPR035669 -
Ssu8g0642 350 PANTHER GDSL-MOTIF LIPASE 9 349 - -
Ssu8g0642 350 Pfam GDSL-like Lipase/Acylhydrolase 29 339 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0642 Ssu-Chr8 10561293 10562833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0642 19 341 Acyl Lipid Metabolism Gene Families AT4G10950 33.742 9.50e-68 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0642 - - gmx:100804640 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0642 8 10561293 10562833 Ssu8g0642 8 10561293 10562833 ECH
Ssu8g0642 8 10561293 10562833 Ssu3g2409 3 75440680 75442532 PCT