Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0617 ATGGACAACCAGCGTAGCCCTCTTCTAAGTTGGGCTTACTACTTTCAGGGAAAGTCAATGGAGGAGCTGAGGCAGTCCCTCATATACACAACCGTGGAGCTAGAACAAACAAGGGCTGCAGTGCAAGAAGAGCTTAGAAAGAGGGATGACCAACTCCTCAACCTTAAGGACCTCCTCAGCAAAACcataagagagagagatgaagcaCAAGAGAAATGCCAGAGACTTCTCTTGGAGAAGCTGGTTTTCCaacagcagcaacaacaacaagcagcagcagcagcagctcCTGTGTCTGGAATTTCCAGCATTGAGGATGAGCCAAGAAGAGGAATTGACTCCAACAACGGCCTCTCATCATCAGACTGTGAAGAGAGCATTGTTTCCTCTCCAGTCATTGACCATTTGCCTCAACCTCAACCCCAATTGCCTCCACAACCCCAACCCCAACCCCAACCCCAACCACAAGTGACACAATCCATGGTTGAACTAACACCAGACAAACCATTACCTGAAAAGGGTAAGCTCTTGCAAGCAGTGATGAAAGCTGGCCCTCTCCTTCAGACCCTCCTCCTTGCAGGACCTCTTCCTCAATGGAGACACCCTCCTCCACCACTTGAGTCCTTTGAGATCCCCCCCGTCACCATTCCTTCACCACCACAACTTCTCCACCAAGATTCCTTTCTTAATGGTAGCAGCACCACAAGCAACTGCGGAAGAGTGAGTCGAAGAAGGGTCTTCTGTGATGGCTCTGATTCTCCTACCGAGACCAAGTACCAAAGGGTTGTACTTCACTGA 798 0.4599 MDNQRSPLLSWAYYFQGKSMEELRQSLIYTTVELEQTRAAVQEELRKRDDQLLNLKDLLSKTIRERDEAQEKCQRLLLEKLVFQQQQQQQAAAAAAPVSGISSIEDEPRRGIDSNNGLSSSDCEESIVSSPVIDHLPQPQPQLPPQPQPQPQPQPQVTQSMVELTPDKPLPEKGKLLQAVMKAGPLLQTLLLAGPLPQWRHPPPPLESFEIPPVTIPSPPQLLHQDSFLNGSSTTSNCGRVSRRRVFCDGSDSPTETKYQRVVLH 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0617 265 MobiDBLite consensus disorder prediction 113 127 - -
Ssu8g0617 265 PANTHER DUF1635 FAMILY PROTEIN 1 264 - -
Ssu8g0617 265 Pfam Protein of unknown function (DUF1635) 18 262 IPR012862 -
Ssu8g0617 265 MobiDBLite consensus disorder prediction 94 158 - -
Ssu8g0617 265 MobiDBLite consensus disorder prediction 137 154 - -
Ssu8g0617 265 PANTHER ENABLED-LIKE PROTEIN (DUF1635) 1 264 IPR012862 -
Ssu8g0617 265 Coils Coil 52 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0617 Ssu-Chr8 10109442 10110410 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0617 - - gmx:100806513 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0617 8 10109442 10110410 Ssu8g0617 8 10109442 10110410 ECH
Ssu8g0617 8 10109442 10110410 Ssu3g2439 3 76003557 76004430 PCT