Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2439 ATGGAGAACCAACGCAGTCCTCTCCTAAGTTGGGCTTACTACTGCCACGGAAAGTCGATGGAGGAGCTGAAGCAGTCCCTGATGTACACTAGCCTTGAACTGGAACAAACAAGAGCAAGTGTCCAGGAGGAGCTGAGAAAGAGGGACGATCAGCTAGTCAGCCTAAAGGAGCTGCTGAACAAGGtcatgagagagagagacgaGGCCGAAGAGAAATGGCAGAGGCTAGTGTTGGAGAAAATGGTTATTCAGCAGCAAACAGCTCCTGCCTCTGGGGTTTCCAGCATTGAGGATGAACCAAGGAGAGGGATTGACTCCAACAATGGCCTCTCGTCGTCAGACTGCGAAGAGAGCATCGTTTCCTCTCCGGTGGGGCCAGCGCAGCCGCAGTTGCCGGAGTCCGTGATTGACTTGATTTCGGCGGATAAACCGTTGCCTGAAAAGGGTAAGCTCTTGCAAGCAGTGGTGAAAGCCGGTCCTCTCCTTCAGTCGCTGCTCCTTGCGGGACCGCTTCCTCAGTGGAGACACCCCCCGCCCCCACTCGAGTCCTTTGAGATTCCGCCCGTCATCATTTCTTCACCGCAGCCACAATTCCCCCACCAAGATTCCAACTGCGGGAGAGTCAGCAGTAGGAAAAGGGTTTTCTGTGAGGGCTCTGATTCTCCCACACAGACCCAGTACCAAAGGATTGTTCTCCACTGA 702 0.5285 MENQRSPLLSWAYYCHGKSMEELKQSLMYTSLELEQTRASVQEELRKRDDQLVSLKELLNKVMRERDEAEEKWQRLVLEKMVIQQQTAPASGVSSIEDEPRRGIDSNNGLSSSDCEESIVSSPVGPAQPQLPESVIDLISADKPLPEKGKLLQAVVKAGPLLQSLLLAGPLPQWRHPPPPLESFEIPPVIISSPQPQFPHQDSNCGRVSSRKRVFCEGSDSPTQTQYQRIVLH 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2439 233 MobiDBLite consensus disorder prediction 88 130 - -
Ssu3g2439 233 MobiDBLite consensus disorder prediction 105 128 - -
Ssu3g2439 233 Coils Coil 52 79 - -
Ssu3g2439 233 Pfam Protein of unknown function (DUF1635) 18 230 IPR012862 -
Ssu3g2439 233 PANTHER ENABLED-LIKE PROTEIN (DUF1635) 1 233 - -
Ssu3g2439 233 PANTHER ENABLED-LIKE PROTEIN (DUF1635) 1 233 IPR012862 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2439 Ssu-Chr3 76003557 76004430 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2439 - - gmx:100782615 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2439 3 76003557 76004430 Ssu3g2439 3 76003557 76004430 ECH
Ssu8g0617 8 10109442 10110410 Ssu3g2439 3 76003557 76004430 PCT