Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0616 ATGTTTGATCCATATAAAGCTGATTTCTTCTTTGTCCCTGTTTACGTGTCTTGCAACTTTAGCACTATCAACGGCTTCTTGACAATAGGTCACTCGTGCTTTCTTATATCCTTTGCTGTGGACCTCGTTTCTACCGAGTACCCATTTTGGAATAACAGCAGAGGATCCGACCATGTCTTCGTCGCTTCCCATGACTTCAGCGCGTACTTCCCCACCTTGGCTTCGTGGAGTCCGAGGTTGGTGGAGTCGGTTGCATTGGGGTGTGTGCTAATTGTGATTGTGAATGGGATATGCTTGCCATTTCCCTCCACCGTGTGCTGGTCGGAGATATCGTTGACGGTGCCAGAGAACGACATAAGGAAGGTTTTAGAGTGTGTGGCCGCAATGAACCTTAGTGCCATTCAAAGGAACCTGTGGTACTCGAGGATCGGGCGAGCATTGCTTTTCAACAATCAGGTGCTGGaagatgatgccacgtggcaagTTGTGGTTGGGCTTAGTGAGAAGATGGGTAGGTCTTATAGGAGGTCTTTGGTTGCTGGCCAATTGGAGAAGGACATGTGA 564 0.4663 MFDPYKADFFFVPVYVSCNFSTINGFLTIGHSCFLISFAVDLVSTEYPFWNNSRGSDHVFVASHDFSAYFPTLASWSPRLVESVALGCVLIVIVNGICLPFPSTVCWSEISLTVPENDIRKVLECVAAMNLSAIQRNLWYSRIGRALLFNNQVLEDDATWQVVVGLSEKMGRSYRRSLVAGQLEKDM 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0616 187 PANTHER GLUCURONOSYLTRANSFERASE, PUTATIVE-RELATED 2 73 - -
Ssu8g0616 187 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 2 73 IPR004263 GO:0006486|GO:0016757
Ssu8g0616 187 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 74 181 IPR004263 GO:0006486|GO:0016757
Ssu8g0616 187 PANTHER GLUCURONOSYLTRANSFERASE, PUTATIVE-RELATED 74 181 - -
Ssu8g0616 187 Pfam Exostosin family 74 125 IPR040911 -
Ssu8g0616 187 Pfam Exostosin family 2 69 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0616 Ssu-Chr8 10077678 10078846 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0616 K20889 - gmx:100797984 148.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0616 8 10077678 10078846 Ssu8g0616 8 10077678 10078846 ECH
Ssu8g0616 8 10077678 10078846 Ssu3g2446 3 76119521 76121550 PCT