Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0586 ATGCAATCTTCAGACACAATAAATTTGTCAACTCCTTTGGAGATCAATTATCAACATATGCAAGCTGAAACCCATTCAGCTTCCAGACTGGTGCATTTGAGCTATGATCCACTCAAAAATGAATTGGATAGAATACGAAAAGTAACAGAACAAACAATGAAATACCATGAAGATATGCAATTGCAGTTGAAAGCTGATTTTGAAAAGGAATTAGCGGAACTCCGCAGGAAGTACgatattaaatttcaagaaattgaagttgaatttaaacaaacaaagatGACTCTGGATACAAGTCTTAATTTAGTTTGTATGAATAAGTTCTTGGCAGAAGCTTTTAGGTTTAAATGCTCGACTCTTAAAGCATCTTGTACATCTGCAATGCAGCAAGATTCAAGTTTTGCACAGCAGCAGTTGCTTCAGCTTTCAAGACAAGAAAGTGCTAGTCGGCCCTCCCTGGTTGCTGGTTCATCTTCCAGTAGGCCTTCTGCGACCAATTTGCAGGAGTCCCTCCACAACGGCTAG 525 0.3714 MQSSDTINLSTPLEINYQHMQAETHSASRLVHLSYDPLKNELDRIRKVTEQTMKYHEDMQLQLKADFEKELAELRRKYDIKFQEIEVEFKQTKMTLDTSLNLVCMNKFLAEAFRFKCSTLKASCTSAMQQDSSFAQQQLLQLSRQESASRPSLVAGSSSSRPSATNLQESLHNG 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0586 174 Coils Coil 64 84 - -
Ssu8g0586 174 MobiDBLite consensus disorder prediction 141 174 - -
Ssu8g0586 174 PANTHER HELICASE PROTEIN MOM1 2 170 IPR039322 GO:0031507
Ssu8g0586 174 Gene3D - 35 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0586 Ssu-Chr8 9446031 9447412 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0586 - - gmx:100781893 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0586 8 9446031 9447412 Ssu8g0586 8 9446031 9447412 ECH
Ssu8g0586 8 9446031 9447412 Ssu3g2482 3 76831064 76843543 PCT