Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0570 ATGGCCACCAACATTCGTAGAGCAACCTATCGCTTTCTCCCTGCTATGGACAGAGATTCCATCTCCAATTCCACCTTCGAATTCGACGAATCCGATCTCTACAACTCCGCGCGCGCTAACCCACCCGAATTCTGCAAATCCGTTCGCGCCTCCAGGTTCCACAGGAACTCGTCTTCCGCCGGCGGCAGCGTCGGTGCTCCGGCGTCGCTGCCGGTGAACGTGCCGGACTGGTCGAAGATTCTCGGCGACGAGTACGGGCAGAGCCGGAGGAGGAACCGCGACGAGGACGAAGCGCAGAGCGATGAGGAAGACGGAGGTGGGAGAGTGCCTCCGCACGAGTTTCTCGCGAAGACGAGAATTGCTTCCTTCTCGGTGCACGAAGGAATTGGGAGGACTCTCAAAGGACGCGATCTCAGTAGGGTCCGAAACGCAATTTGGGCCAAAACTGGCTTCGAAGACTAG 462 0.5823 MATNIRRATYRFLPAMDRDSISNSTFEFDESDLYNSARANPPEFCKSVRASRFHRNSSSAGGSVGAPASLPVNVPDWSKILGDEYGQSRRRNRDEDEAQSDEEDGGGRVPPHEFLAKTRIASFSVHEGIGRTLKGRDLSRVRNAIWAKTGFED 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0570 153 Pfam Senescence regulator 48 153 IPR007608 -
Ssu8g0570 153 MobiDBLite consensus disorder prediction 55 113 - -
Ssu8g0570 153 PANTHER EMB|CAB72159.1 4 153 - -
Ssu8g0570 153 PANTHER EMB|CAB72159.1 4 153 - -
Ssu8g0570 153 MobiDBLite consensus disorder prediction 83 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0570 Ssu-Chr8 9187867 9188328 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0570 - - pvu:PHAVU_005G134900g 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0570 8 9187867 9188328 Ssu8g0570 8 9187867 9188328 ECH
Ssu8g0570 8 9187867 9188328 Ssu3g2498 3 77363448 77363919 PCT