Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2498 ATGGCAACCAATCGGTTCACGGTCGCGGCTCCTGCTTGGCCAAGAAAAAACCCTCCTCCTCCGGCTGCTCCGGCGTCGGTGCCGGTCAATATCCCCGACTGGTCGAAGATCCTCGGCGACGAGTACCGAAGAAGGAACAACGTCATCGACGACGAGGACGAGGGTTACGATGTTGAGAGGAGTACGAGGGTGCCGCCGCACGAGTTTCTGGCGAGGACAAGGGTTGCTTCCTTCTCCGTGCACGAAGGTGTGGGAAGAACCCTCAAGGGAAGGGATCTCAGCACGCTCCGAAACGCCATTTGGGCCAAAACCGGTTTCCAAGACTAA 327 0.5841 MATNRFTVAAPAWPRKNPPPPAAPASVPVNIPDWSKILGDEYRRRNNVIDDEDEGYDVERSTRVPPHEFLARTRVASFSVHEGVGRTLKGRDLSTLRNAIWAKTGFQD 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2498 108 MobiDBLite consensus disorder prediction 1 27 - -
Ssu3g2498 108 PANTHER SENESCENCE REGULATOR S40-RELATED 16 108 - -
Ssu3g2498 108 PANTHER EMB|CAB72159.1 16 108 - -
Ssu3g2498 108 Pfam Senescence regulator 21 108 IPR007608 -
Ssu3g2498 108 MobiDBLite consensus disorder prediction 13 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2498 Ssu-Chr3 77363448 77363919 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2498 - - gmx:100782946 155.606
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2498 3 77363448 77363919 Ssu3g2498 3 77363448 77363919 ECH
Ssu8g0570 8 9187867 9188328 Ssu3g2498 3 77363448 77363919 PCT