Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0512 ATGTCGTCCATCTTTCGGCAATACACCTTCGACGACTCATTCGAACAAGTGTTCGTGTCCGGCAAGTTCCTGAAGGAATACCAAATCGCCCTGACCTTCGCGACCGACTACGACGAGAACGACGTCCCCACCAACGGCGTCTTCAGACCCACATGGGACCTCACAAAGGTGACTCCCGAGTCCATCACGCGCTTCAAGAAGGAGCACCCCGACGTGGACGTCAAGGTCTTCATCAGCATCGGAAACCGCGGCACCCTCTTCCCCTTCAAACCCCTCGACAACAAAACGTGGGTCGCCAACGCCACCGACTCGCTCACGCGCCTCGTCAAGAGCGAGGACTACGACCTCCAGGTGGACGGCATCGACGTGCTGTACGAGCACGTCGATGCCTCCCCCGGTGACTTTATCGAGTGCGTGGGGCAGGTCATAAGGAACCTCAAGGAGCGGAGGGTGGTCACCGAGGCTTCCATTTCTCCGTCGTTCGCGCTCAACACGGAGTACTACTCGTGCTTGTACAGCGCCGTGTCGTTCTTCATCGACTGGGTGGATTACCAGTTCCAGAACGAGGTTAGTCCTGTGTACGACCCCAACAAGTTGGTGCAGCGCTACAATGAACTAGCGAGGGAGGTTTATCCGAGGAGAAAACTCTTCGCTGGATACAGCGCCGAGAACGAGGACTGGGCCACGCTGTCGCCGATCGTCTTCTTTCTCGGTGGCATGGACATTCTCAAGAAGAGAAGAGCTCCTGGCGTTTCCATTCATTACCATAATTACTATGCAGAAGCTCCGCATAAGGATGAATGA 804 0.5585 MSSIFRQYTFDDSFEQVFVSGKFLKEYQIALTFATDYDENDVPTNGVFRPTWDLTKVTPESITRFKKEHPDVDVKVFISIGNRGTLFPFKPLDNKTWVANATDSLTRLVKSEDYDLQVDGIDVLYEHVDASPGDFIECVGQVIRNLKERRVVTEASISPSFALNTEYYSCLYSAVSFFIDWVDYQFQNEVSPVYDPNKLVQRYNELAREVYPRRKLFAGYSAENEDWATLSPIVFFLGGMDILKKRRAPGVSIHYHNYYAEAPHKDE 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0512 267 Pfam Glycosyl hydrolases family 18 61 232 IPR001223 GO:0005975
Ssu8g0512 267 Gene3D Glycosidases 2 266 - -
Ssu8g0512 267 PANTHER CHITINASE 2-LIKE 1 265 - -
Ssu8g0512 267 PANTHER RUBISCO-ASSOCIATED PROTEIN 1 265 - -
Ssu8g0512 267 SUPERFAMILY (Trans)glycosidases 29 254 IPR017853 -
Ssu8g0512 267 PRINTS 2-S globulin family signature 103 125 IPR000677 -
Ssu8g0512 267 PRINTS 2-S globulin family signature 62 80 IPR000677 -
Ssu8g0512 267 PRINTS 2-S globulin family signature 45 60 IPR000677 -
Ssu8g0512 267 PRINTS 2-S globulin family signature 177 200 IPR000677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0512 Ssu-Chr8 8085617 8086420 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0512 - - gmx:100776259 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0512 8 8085617 8086420 Ssu8g0512 8 8085617 8086420 ECH
Ssu8g0512 8 8085617 8086420 Ssu3g2567 3 78630077 78631021 PCT