Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0495 ATGGCGGCATCATCCACCTCTGCTGTTTCAGTTGATTCCAGAGACAACAAGTTGTGGAAAGGGGCATTTGCTGTCGCTGGAATCATGGTTACCCTCGTCACCTATGGTGTCTTGCagGAAAAGATCATGAGTGTACCGTATGGGGCAGAAAAGGAGTATTTCAAGTATTCACTGTTTCTTGTTTTCTGCAACCGCATCACAACATCTGCTGTTTCTGCCGGTTCTTTGCTGGCAAGTAAAAAAGCAATGGACCCAGTAGCTCCCATTTATAAGTATTGCCTTATCTCGGTATCAAACATACTAACTACAACTTGCCAGTATGAGGCCCTCAAATATGTTAGTTTTCCTGTTCAGACCCTTGCTAAATGTGCAGAAATGATACCAGTTATGATCTGGGGTACCCTCATTATGCAGAAGATATATCGAGGACCTGACTATTTGTGGGCTTTTTTAGTTACCCTTGGCTGCTCAGTATTTATCCTATATCCGgcAGGAACAGACATAAGTCCTTACCGTAGAGGAAGGGAAAACACAGTTTGGGGTGTTCTCCTAATGATTGGTTATCTTGGGTTTGATGGCTTTACAAGCACATTCCAAGATAAGCTGTTTAGAGGCTATGACATGGAGATACATAATCAGATATTTTACACAACATTGTGTTCTTTTATTCTTAGTCTGACAGgtcTTATCTTACAAGGACATTTCATGCCAGCAATAGAATTTGTTTATCACCGTCATGATTGTTTCTTTGACATAGCATTGCTTTCGACTGTTGCGAcagttaatcaattttttatttcctacaCAATTCGCACATTTGGTGCTCTAACATTTGCAACCATAATGACCACAAGACAGGTCATTGTCTTTGGCTCCCTTTATGCAAAAAGCTTCTGGAGGAAAGTGCCTCAAAAGACAACATCCGCTGTAGCACTTGTTCAAAATGGGGATTCAAATAATTTGAAGGACAACCCGTGA 978 0.3998 MAASSTSAVSVDSRDNKLWKGAFAVAGIMVTLVTYGVLQEKIMSVPYGAEKEYFKYSLFLVFCNRITTSAVSAGSLLASKKAMDPVAPIYKYCLISVSNILTTTCQYEALKYVSFPVQTLAKCAEMIPVMIWGTLIMQKIYRGPDYLWAFLVTLGCSVFILYPAGTDISPYRRGRENTVWGVLLMIGYLGFDGFTSTFQDKLFRGYDMEIHNQIFYTTLCSFILSLTGLILQGHFMPAIEFVYHRHDCFFDIALLSTVATVNQFFISYTIRTFGALTFATIMTTRQVIVFGSLYAKSFWRKVPQKTTSAVALVQNGDSNNLKDNP 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0495 325 Pfam UAA transporter family 22 288 IPR013657 GO:0055085
Ssu8g0495 325 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 7 287 IPR013657 GO:0055085
Ssu8g0495 325 PANTHER UDP-GALACTOSE/UDP-GLUCOSE TRANSPORTER 5 7 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0495 Ssu-Chr8 7787389 7792933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0495 14 298 Organic Solute Cotransporters AT5G59740 76.299 1.12e-173 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0495 K15276 - gmx:100789415 568.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0495 8 7787389 7792933 Ssu8g0495 8 7787389 7792933 ECH
Ssu8g0495 8 7787389 7792933 Ssu3g2592 3 79342316 79347203 PCT