Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2592 ATGGCGGAAACAACCTCTGCttctgtttcttcttctttgggtGATTCGAATTGGAGAGAGAACAAGTTATGGAAAGGCACATTTGCGGTCACCGGAATCATGGTCACCCTCGTTACCTATGGCGTATTGCAGGAAAAGATCATGAGAGTCCCTTATGGGGTGAACAAGGACTACTtcaaatattctctttttcttgttttctgcAACCGTATCACGACGTCTGCTGTTTCGGCAGGTGCTTTACTGGCAAGTAAAAAAGCATTGGATCCTGTAGCTCCCATTTATAAGTATTGCCTTGTGTCAGTATCGAACATACTGACCACAAGTTGTCAGTATGAGGCCCTCAAATATGTTAGTTTCCCTGTTCAGACTCTTGCAAAGTGTGCTAAAATGATACCAGTTATGGTCTGGGGCACTATCATAATGCAGAAGAGATATCGGGGAACTGACTATTTGTGGGCCTTTTTAGTAACCCTTGGCTGCTCAGTGTTCATCCTATATCCGGCAGGGACCGACATAAGTCCATATGGTAGAGGAAGGGAAAATACTGTTTGGGGCATTTTGCTAATGATTGGTTATCTTGGGTGTGATGGCTTTACAAGCACATTCCAAGATAAGCTGTTTAAAGGCTATAACATGGAGATACATAATCAGATATTCTATACTACTTTGTGTTCTTGTATTCTTAGCCTGACAGGTCTTATCTTACAAGGACATTTGTTACCAGCGGTAGAGTTTGTTTATCTCCATAAGGATTGTTTCTTTGACATTGCATTGCTTTCTACTGTTGCAACAGCTagccaattttttatttcctacaCAATTCGCACATTTGGTGCTCTAACATTTGCTACTATAATGACAACAAGACAGTTGGTAAGCATCATGCTGTCATGTGTGTGGTTTGCCCATCCTCTTAGCTGGGAACAGGGGATTGGAGCTGTAATTGTCTTTGGCGCCATTTATGCAAAAAGCTTCTTGAGGAAAGCACCGGAAAAGACAACCTCTTCTGTGGAACATGTACAAAATGGAAGTTCAAATAATTTGAAGGAGAACCCATGA 1062 0.3945 MAETTSASVSSSLGDSNWRENKLWKGTFAVTGIMVTLVTYGVLQEKIMRVPYGVNKDYFKYSLFLVFCNRITTSAVSAGALLASKKALDPVAPIYKYCLVSVSNILTTSCQYEALKYVSFPVQTLAKCAKMIPVMVWGTIIMQKRYRGTDYLWAFLVTLGCSVFILYPAGTDISPYGRGRENTVWGILLMIGYLGCDGFTSTFQDKLFKGYNMEIHNQIFYTTLCSCILSLTGLILQGHLLPAVEFVYLHKDCFFDIALLSTVATASQFFISYTIRTFGALTFATIMTTRQLVSIMLSCVWFAHPLSWEQGIGAVIVFGAIYAKSFLRKAPEKTTSSVEHVQNGSSNNLKENP 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2592 353 Pfam UAA transporter family 27 325 IPR013657 GO:0055085
Ssu3g2592 353 PANTHER UDP-GALACTOSE/UDP-GLUCOSE TRANSPORTER 5 18 337 - -
Ssu3g2592 353 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 18 337 IPR013657 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2592 Ssu-Chr3 79342316 79347203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g2592 19 336 Organic Solute Cotransporters AT5G59740 83.333 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2592 K15276 - gmx:100782423 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2592 3 79342316 79347203 Ssu3g2592 3 79342316 79347203 ECH
Ssu8g0495 8 7787389 7792933 Ssu3g2592 3 79342316 79347203 PCT