Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0491 ATGGAAGATCCCTCTGGTTCCATATTCAATTATCACGAGAGCTGTGACGAGTTGAGGCAAAAGCTCTTGGCCACCACATTGGAGCTGGAGACCATGAGGAACGTGAAGAGGGAACTGTTGAATCTGCTGAAGATGGCATACCAAGAGAGAGACGAAGCGAGAGGAGAGCTTCAGAAACTGGTTAAGAAACTAACGCCCCCCACATTGGTTGAAGTACCCTCCATGATGATGATTCCCGCGCCAACCAAAGCGAACTcgagcatcacagaatccaacagCCCCTCGCACGTTTCCTCGCCGGTAGATTCCCTTCTCGAGGCCGTTTCTCCTCGGGAGTTCTCCAACAACGCGAACGCCGCTGTCGAGTCCCACAGCTTGTGTTATCTCAACCAGCCCCTGCTTCAAAACGCGCGTCTCTCTGCCTCCCCTGCTTTGGTCTCTTCCCAGAAACCCGCGTGCGATGTTGCCAACCAAGTGATCGAGTTCCTTGCCAAGGGAAAAGCCCTGCCGCAAAAGGGTAAGCTCCTTAAGGCCGTGATGGACGCGGGTCCGTTGCTTCAGACGCTCCTCGTCGCGGGGCCACTTCCCACGTGGCGAAACCCCCCTCCTTTGCAGACCGTAAAGATTCCTCCTCTCAAGGTTCAAgactttggttccaacaatgcGAATACATTGATTTCACTTCACAAACCACCAACGCTTCAACCCTCTCGTTCTTCGCAGCCTTCCGTGCTCAATGTTGCTGTTGTCAACAATGCAATGCAGCTCACCTCAAATGCTACTTGCAAGGACCTCGCCCCATCGAGGATTCCACAAGGCCATCAGTATCTCCTACGAAATTAA 843 0.5053 MEDPSGSIFNYHESCDELRQKLLATTLELETMRNVKRELLNLLKMAYQERDEARGELQKLVKKLTPPTLVEVPSMMMIPAPTKANSSITESNSPSHVSSPVDSLLEAVSPREFSNNANAAVESHSLCYLNQPLLQNARLSASPALVSSQKPACDVANQVIEFLAKGKALPQKGKLLKAVMDAGPLLQTLLVAGPLPTWRNPPPLQTVKIPPLKVQDFGSNNANTLISLHKPPTLQPSRSSQPSVLNVAVVNNAMQLTSNATCKDLAPSRIPQGHQYLLRN 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0491 280 Pfam Protein of unknown function (DUF1635) 13 222 IPR012862 -
Ssu8g0491 280 PANTHER HIGH MOBILITY GROUP BOX PROTEIN, PUTATIVE (DUF1635)-RELATED 1 261 - -
Ssu8g0491 280 PANTHER ENABLED-LIKE PROTEIN (DUF1635) 1 261 IPR012862 -
Ssu8g0491 280 Coils Coil 36 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0491 Ssu-Chr8 7736225 7738367 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0491 - - gmx:100788888 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0491 8 7736225 7738367 Ssu8g0491 8 7736225 7738367 ECH
Ssu8g0491 8 7736225 7738367 Ssu3g2595 3 79351873 79354699 PCT