Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0453 ATGAAGGTGAAGGAAATGGGAGGCGCGAGCATCAGCAACGCCTTCAGCGTGGCACAATTATCTATATCCAGAATCAGAACCAACCGCACCGTCTCTTTCTTCTTCGTTCGAGCCTGCGACGACCGCCCTCGAGGCCCCTCCTGCATATTTGTCGGCCCCCTCCACACCGCCAGCAAAGAGACCCTCGAAGCTCTTTACTCCCAGGCACGGGATGCATATTACAGTGGAAAGCCTTTGATAGTTGATGACATGTTTGATAGAGTAGAGTTGAAGCTTAAGTGGTATGGTTCTAAGTCAGTCGTCAAGTATCCTCGATGCAGTATCAGGAGGCATTCAACATATGCTGATGCTGACGAAGATCTGTCTATGGCTTTTGCATTAGCAAGCTTATGGTCCCTATTTCTTGCACTTGGCTGTTCAGCATGTGCTTGGCCCCTATTGTACACCGTTGGCACAGCTTATCAAAAAACATTCGACTCAGGATTATCATATGGTAGCCAAGCTTCAGGACTAGGGCTTCTCTTTGTGGTGAATAGCATTATCTTCATGGCACTGGGTTTGGTCATTGGGTACCCAGTTGCTTCAGCTTCAGTTAAGGTGCTTCAAGGCCTGTGGAGGAATGATTTAGCGGCACTAAAGGGTTCATGTCCAAATTGTGGAGAAGAGgTATTTGCATTTGTGAGAACGGACAAGGCTAATAACTCACCCCATAGAGCAGATTGTCATGTGTGTGAATGCTTATTGGAATTTCGCACCAAAGTTGAGCAATCGGCTTTAAGATTAGATAGACAATGGGTTTATGGGCGTATTTACCTTGTTCGCAGATCCCGCCGCCAGAGAGAGCTGTAA 849 0.4711 MKVKEMGGASISNAFSVAQLSISRIRTNRTVSFFFVRACDDRPRGPSCIFVGPLHTASKETLEALYSQARDAYYSGKPLIVDDMFDRVELKLKWYGSKSVVKYPRCSIRRHSTYADADEDLSMAFALASLWSLFLALGCSACAWPLLYTVGTAYQKTFDSGLSYGSQASGLGLLFVVNSIIFMALGLVIGYPVASASVKVLQGLWRNDLAALKGSCPNCGEEVFAFVRTDKANNSPHRADCHVCECLLEFRTKVEQSALRLDRQWVYGRIYLVRRSRRQREL 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0453 282 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 15 280 IPR039987 GO:0009535|GO:0009773|GO:0016730
Ssu8g0453 282 PANTHER PGR5-LIKE A PROTEIN 15 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0453 Ssu-Chr8 7189564 7191357 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0453 - - gmx:100791480 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0453 8 7189564 7191357 Ssu8g0453 8 7189564 7191357 ECH
Ssu8g0453 8 7189564 7191357 Ssu3g2637 3 79960259 79970096 PCT