Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2637 ATGCGATGCGAATTGTGGTATGGGTTGATGGCCGGCACGAGCCTCTCTCACGTGATCCAATCGACGCTCCGGGAACTGCCCAGAAACAACCGCCACGTCAGAATCTCGGCCAAAAGCCACCGTGTCTCCGCCACCTTCGACGGACGCCACAAGGGACCCTACTGCATCTACGTTGGCCCCCTCGAAACCGCCAACAAAGAGACCCTTGAAGCTCTCTATTGCCAAGCACGGGATGCTTATTATAGTGGTCACCCTCTGATAGTTGATGACATGTTTGATAGAGTAGAGTTAAGGCTAAGATGGTATGCTTCAAAGTCGGTTGTAAAGTATCCTCGGTGCAGTATCAGGAGGCAATCCACATTTGCTGATGCTGagGAAGATCTGTCTATGGTTTTTGCATTAGCAAGCACATGGGCCATGTTCCTTGCATTTGGCAGTTTAGCATGCGTTGGGCCCTTAGCATACACTGTTGGCATGGCTTATCAAAATGCATTCGATTCAGGCTTATCAATTGCTAGCCAAACACATGGACTAGGGTTTTTGGCCTTGGTGAACAGCCTTATTTTAATTGTGCTGGGTTTTGTCATCGGCCACCCCGTTGCTTCAGCTTCAGCTAAGGTGCTTCAGGACCTTTGGAGGAATGACTTGGTGGCACTAAAAGGGGTATGTCCAAATTGTGGAGAAGGGGTATTTGCATTTGTGAATATGGACAGGAATATTGACTCACCTCACAGAGCAGATTGTCATATCTGTGAATGCTTATTAGAATTTCGCACAAAAGTGGAGCAACACCAAGACCCCAACAAAATGTGGGAACCCATTCGGGAATTCTATGTTTATGGCATAAACATCAAGGATAAATGGTCCTTCAGAATTTGCCTGCAAGCAACTTTATTTCACGGTTCAACAAACAGAATTTCGATTGTCATCAGTTCTGCAATCCACAAAATTTTCTGTAGTACGAGATGTCATTAG 975 0.4615 MRCELWYGLMAGTSLSHVIQSTLRELPRNNRHVRISAKSHRVSATFDGRHKGPYCIYVGPLETANKETLEALYCQARDAYYSGHPLIVDDMFDRVELRLRWYASKSVVKYPRCSIRRQSTFADAEEDLSMVFALASTWAMFLAFGSLACVGPLAYTVGMAYQNAFDSGLSIASQTHGLGFLALVNSLILIVLGFVIGHPVASASAKVLQDLWRNDLVALKGVCPNCGEGVFAFVNMDRNIDSPHRADCHICECLLEFRTKVEQHQDPNKMWEPIREFYVYGINIKDKWSFRICLQATLFHGSTNRISIVISSAIHKIFCSTRCH 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2637 324 PANTHER PGR5-LIKE A PROTEIN 23 271 - -
Ssu3g2637 324 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 23 271 IPR039987 GO:0009535|GO:0009773|GO:0016730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2637 Ssu-Chr3 79960259 79970096 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2637 - - gmx:100810752 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2637 3 79960259 79970096 Ssu3g2637 3 79960259 79970096 ECH
Ssu8g0453 8 7189564 7191357 Ssu3g2637 3 79960259 79970096 PCT