Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0452 ATGGGTACCCCcaagaagaatgaaaataaggGCTTTTTCGCCGCCATGACTTCCGGCTTCTCCATGTTCAGCAACGCCATGCACCGATCTGTCAACGGGTTGCTGGGATATGAAGGGGTAGAAGTCATAAATCCGGAGGGTGGTAAAGAGGATGCAGAGGAGGAAGCTCAGAGAGGAAGATGGAAACCAGAGGAAAGAGATAGTTACTGGAAGATGATGCAGAAATATATTGGCTCAGATGTAACATCAATGGTAACACTAccagttattatttttgaaccaATGACTATGCTTCAGAAAATGGCAGAGTTGATGGAGTACTCCTACCTGTTAGATCAGGCAGATGAATGTGAGGACCCATACATGCGGCTGGTGTATGCATCATCATGGGCTATATCTGTGTACTTTGCATACCAACGAACCTGGAAGCCTTTTAATCCTATCCTTGGAGAGACTTATGAGATGGTTAACCATGGTGGTATTGCATTTCTTGCAGAACAGgtGAGTCACCATCCCCCAATGAGTGCTGGGCATGCTGAGAATGAGCATTTTACGTATGATGTGACTTCAAAGTTAAAGACTAAGTTTTTGGGAAATTCTGTTGATGTTTACCCTGTTGGAAGAACACGTGTAATGCTTAAGAGGGATGGTGTAATCTTAGATTTGGTTCCCCCTCCAACTAAggttaataatttgatatttggCCGGACATGGATTGATTCACCTGGGGAGATGATAATGTCAAATTTGACAACTGGGGACAAAGTTGTACTATACTTTCAACCATGTGGATGGTTTGGGGCTGGTCGCTATGAAGTAGATGGATATGTTTATAATTCTGCTGAGGAGCCTAAAATATTGATGACTGGGAAGTGGAATGAGTCAATGAGTTATCAACCTTGTGATTTGGAAGGAGAGCCTCTTCCAGACACAGAATCaaaagagGTTTGGCATGTTGCTGATGTTCCACAGATTGATAAATTCCAGTATACATACTTCGCACATAAAATAAACAGCTTTGACACTGCCCCTAGAAAATTGTTGGCATCAGACTCTCGTTTACGCCCAGATAGATATGCACTTGAGATGGGTGATCTATCCAAATCAGGGGCAGAAAAGAGCAGTTTGGAGGAGAGGCAACGTGCTGAAAAGAAAACCCGAGAAGCCAAAGGGCATAACTTCACACCAAGATGGTTTGATTTAACTGAAGAAGTGACACCAACTCCTTGGGGTGATTTGGAGATCTACCAATACAATGGTAAATACACTGAGCATCGGGCTGCTATAGATAACTCAGGCAGCATCGATCATGTTGATAATAAAGAAATCGAATTCAATCCATGGCAGTATGGTAATTTGTCCACAGAAGAGtag 1374 0.4112 MGTPKKNENKGFFAAMTSGFSMFSNAMHRSVNGLLGYEGVEVINPEGGKEDAEEEAQRGRWKPEERDSYWKMMQKYIGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSYLLDQADECEDPYMRLVYASSWAISVYFAYQRTWKPFNPILGETYEMVNHGGIAFLAEQVSHHPPMSAGHAENEHFTYDVTSKLKTKFLGNSVDVYPVGRTRVMLKRDGVILDLVPPPTKVNNLIFGRTWIDSPGEMIMSNLTTGDKVVLYFQPCGWFGAGRYEVDGYVYNSAEEPKILMTGKWNESMSYQPCDLEGEPLPDTESKEVWHVADVPQIDKFQYTYFAHKINSFDTAPRKLLASDSRLRPDRYALEMGDLSKSGAEKSSLEERQRAEKKTREAKGHNFTPRWFDLTEEVTPTPWGDLEIYQYNGKYTEHRAAIDNSGSIDHVDNKEIEFNPWQYGNLSTEE 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0452 457 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 453 IPR000648 GO:0008289
Ssu8g0452 457 MobiDBLite consensus disorder prediction 371 389 - -
Ssu8g0452 457 Pfam Oxysterol-binding protein 68 426 IPR000648 GO:0008289
Ssu8g0452 457 ProSitePatterns Oxysterol-binding protein family signature. 166 177 IPR018494 -
Ssu8g0452 457 Gene3D - 358 449 - -
Ssu8g0452 457 MobiDBLite consensus disorder prediction 366 389 - -
Ssu8g0452 457 Gene3D - 150 328 - -
Ssu8g0452 457 SUPERFAMILY Oxysterol-binding protein-like 62 438 IPR037239 -
Ssu8g0452 457 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3C-LIKE ISOFORM X1 1 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0452 Ssu-Chr8 7181347 7186627 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0452 - - gmx:100779808 906.746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0452 8 7181347 7186627 Ssu8g0452 8 7181347 7186627 ECH
Ssu8g0452 8 7181347 7186627 Ssu3g2639 3 79994037 79994711 PCT