Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2639 ATGGACGATCTGTCAAAATCTGGGACAAAAAAGAGCAGTTTAGAGGAGAGTCAACATGCTGAAAAGAGAACTCGAAAAGAAAAAGGGCATAACTTCACGCCAAGATGGTTTGATTTAACTGAAGAAGTGGCACAAACTCCTTGGGGTGATTTGGAAATCTATCAATATAATGATAACTCGGGAAGCATTGATGATGTTGATGTCAAATCAACTGAATTCAATCCATGGCAGTATGGTAATTTGGCCATGGAATGA 255 0.3882 MDDLSKSGTKKSSLEESQHAEKRTRKEKGHNFTPRWFDLTEEVAQTPWGDLEIYQYNDNSGSIDDVDVKSTEFNPWQYGNLAME 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2639 84 SUPERFAMILY Oxysterol-binding protein-like 2 76 IPR037239 -
Ssu3g2639 84 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3B 1 80 - -
Ssu3g2639 84 MobiDBLite consensus disorder prediction 1 31 - -
Ssu3g2639 84 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 80 IPR000648 GO:0008289
Ssu3g2639 84 Gene3D - 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2639 Ssu-Chr3 79994037 79994711 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2639 - - gmx:100810228 148.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2639 3 79994037 79994711 Ssu3g2639 3 79994037 79994711 ECH
Ssu8g0452 8 7181347 7186627 Ssu3g2639 3 79994037 79994711 PCT