Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0399 ATGATCATGGACAGATCATCGCAAAGCAGCTCCGACTCACCGACCCGCGACCCGAAAGTGCTATCCATCGAATGTCTGAAGGGAAGCTCCAAGGCCGACGAGTGGACCGGCGACATGCTCCAGACCGGCGACATCGTCGAGGAGCTCCGAATCGGCTCGTCGGCGAACTCGCAGATCCGCTACAAGTCGCCGTTCAAGGGCGGAAAAAACGGCGTGCAGAGGATTCTGCACGACACCTACAAGAAGAAGGAGACGTCGATCGCGGTTCGGGTCCGGCGAGGACCCGACGAGTTGGTGGAGTTGCAGGCATGCATCGTGCCCAACGAATTCACCGCCAAGAAGAGCTTCGTCCTTCGCTCTATTACTGACCCGAATTACGTCGTCGGGTTCTTGGATCGGACCGAAGCCGAATGCTTCGAGCTTCAAGCTTCAAGGAGCACTAGGATGGTAAATGCACTAACCAGGACCAAGCTACAGGATGGATATGTTTCGTATTCATGGGAGAGAAGGATGCAGGAAATGCTACCAGTTCCCAATTCTAGCAACTTCCTTTCCATATTATTCCTTCCCAAAGCTTCAGATCGGGTAGCTTCTCGCTACAATGATCTGGAGGACACCCTAGCCAGGGCAAATGCATGGCTCAATGCAGGTCAAGCTTCAGGGGTCCCTGTTGTCTTCATGAACATCCAAACTGAGTCCCTACTTACTAAGATATCTGGAGAGACAGCTTCTTCCACTGTGAATGCAGGGTCATTATCGGACTTAGCTAACTTAGCAAATGCAAGCCTTTACGGCTTTGAGGATTACCATGGAATAGACATCGGTGTTGTTCGAGCAGTTCGCCTATGGTATGCTCCAGTTGCAGGAGAGTTCTCCATTGAGATAAAACTAAAAGAGGAAGACGCAAAGCTTGGGTTTGCCATTAGTCGTACTGAAGAGggattttttttcatctcatcaGTCATTAATCAAGAAAATGTACCTGCCACTCGATCAGGGCTGAGCAATCTGTATAAACTAGCAACGGATACTTGTAGGTTGTTGGTAGTTTCAAGAGTGTCAAATCAAAAAGTCCTTCCATGGATGGTTTCTTCCACAGGAGCCATTCGGTGTTATGACACTGTTTCACTCAGCCAGAAGCTCTCCTTGCACCGACACACCAGAGTTCCCATTCTCCTGCACGTCTTCCTTTGGGACCGGGCTTTGACTTCTTCAAGTGGAGGAAGCACTAGATTTAGGGCTCTATCTTCTTCTGTGCTGCAATCAGTATCACCATCTGAAGTTCCACTGGCACGCCTTCCAAACGAAAGTCATGTACTGCCGTTGCCCCCCGTTCCTTCTGAACCAAGTGATATTACAAGTGAAATTTCGCACTCCAGGCTTGAAAGAGACACAGCTGGGGAATCCTCTTTTAGATTCCACGATTTTTCCTTGTCCAGCAACTGGGTATGA 1452 0.4904 MIMDRSSQSSSDSPTRDPKVLSIECLKGSSKADEWTGDMLQTGDIVEELRIGSSANSQIRYKSPFKGGKNGVQRILHDTYKKKETSIAVRVRRGPDELVELQACIVPNEFTAKKSFVLRSITDPNYVVGFLDRTEAECFELQASRSTRMVNALTRTKLQDGYVSYSWERRMQEMLPVPNSSNFLSILFLPKASDRVASRYNDLEDTLARANAWLNAGQASGVPVVFMNIQTESLLTKISGETASSTVNAGSLSDLANLANASLYGFEDYHGIDIGVVRAVRLWYAPVAGEFSIEIKLKEEDAKLGFAISRTEEGFFFISSVINQENVPATRSGLSNLYKLATDTCRLLVVSRVSNQKVLPWMVSSTGAIRCYDTVSLSQKLSLHRHTRVPILLHVFLWDRALTSSSGGSTRFRALSSSVLQSVSPSEVPLARLPNESHVLPLPPVPSEPSDITSEISHSRLERDTAGESSFRFHDFSLSSNWV 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0399 483 PANTHER - 1 483 - -
Ssu8g0399 483 MobiDBLite consensus disorder prediction 439 458 - -
Ssu8g0399 483 PANTHER OS02G0717600 PROTEIN 1 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0399 Ssu-Chr8 6386375 6390989 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0399 - - gmx:100798931 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0399 8 6386375 6390989 Ssu8g0399 8 6386375 6390989 ECH
Ssu8g0399 8 6386375 6390989 Ssu3g2710 3 81097001 81100381 PCT