Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0395 ATGCACCAGTTGAAAATCCATTTTGTTCTCTTTCAATTGTCAATAAAAATTCCAAGCATATCAATATTCTACTACACATACTATCTTCTCGGCATTTACATTACATGCTCCACTTTGTTCTTTCCTCTGTTGTGTCTCATGGCTGCAACCGGAACCGCAACCGCAAAAGTTTTCCAAGACCATAACAACCAAAGAAACAATGGCAACAACCCCGAAATAACAAGGGAGGAAATCCAAACCGCCATAGCCAAAGCAGTGGAGTTAAGGGCCCTTCATGCTGCATTAACACATGGAAGTAGCCCAGGCACAACCAATGCTAGATTCCCATCACCTTCCCCTGCTTCTCACTTCTCTGCCCAAGATTACCCTGTGTTCACACCAAGTTATGAAGATGAGGCACACCATAACCCAACAAAGAGCAGAACAATATCAGAAAGTTGGGATGAGAATGGGGTAGAAGGAGGGAACAGCATGGCCCCTCCAGATAACAAGGAGAAATCAAGTTCAAGAAAGGGACTACCTTTTGGATTTGCCAACCTTGACTCTCACATGTGTCCTGCTGATGATAGCAAATCTGTGAGTGGTTCTTGTGCAAATCACATTACTGTTCTCCAAACATCACCTGCAAATGACTACTTCTTCAGGAGGAGAAACAGTTTGGGGGACTTGAAGCCCTTTTCTTCCTGCAATAGATGCAACCCTGCTGTCTTAACTAGTGAATATGAGAACACAAGGAACAACAAGAGCTCCAACACTGTTGTCCCCCTCACAGATTCCCATGCCTCTTTTCAAACCCAACCAAAAAGTAAAGGGGTGATTTCCTGGCTGTTCCCTAGGTTCAAGAAGAAGCATAAGAACGTGAGTTCCCCAACCAGAACAGAATCCGAGGAAGTCTCTCAGGTTCTCAAGGACATGGGAATAATGTCAGTTGAGGCACTGAAGAGGGAACTAATGGAAGCAAATGAGAGCAGAGATGCCGCCTTGATGGAAGTTTCTGAGATGAGATCTTCACTGGGGGACCTGAAACAAAAGCTGGAGTACTTGGAGAGTTACTGTGAAGAGTTGAAGAAAGCTTTGAGGCAAGCAATGGTCACCAAAGAAACCACACTTTCTGAAAAGCTTAATAACCCACCCCAGAAAGGAATATCCTTTGATGGGAATGGGGAAAATTTGATGCCTTTGGGTGAGGAGGTTATGGTAGAGGGCTTCTTGCAGATAGTGTCAGAGTCAAGGTCATCAGTGAAGCAATTCTGCAAGACCCTTATATGCCAGATTGAAGAAACTGATCATTCTTTGATGGACAACTTGAACTTGCTTCTCCAACCATACAGACTCTCCCTGAATACCAAATACTCAAAGGCAGTTCTATACCATTTTGAAGCCTTCATAAACCAGTCCTTCTACCAAGACTTTGAGAACAGTGTGTTCCAAAAGAATGGGTGCACAAAATTCTTGGACCCTCGACAAGATCGCCAAGCACAATTCTCCTCGTTTGTTGCACTTAGGAATTTGAGCTGGAACGAGGTGCTCAGAAAGGGCACTAAATATTACAGTGAAGAGTTCAGCAAGTTCTGCGACCAGAAAATGAGTTGCATCATCACTACACTGAATTGGACCAGGCCTTGGCCCGAGCAACTCCTTCAGGCTTTCTTTGTGGCAGCAAAGTGCATATGGTTGCTACATTTGCTGGCCTTTTCTTTCAACCCTCCATTGGGAATTTTAAGGGTTGAAGAGAATAGAAGCTTTGATCCTTACTACATGGAAGATTTGGTCACGGATAGACAGAGGTCACAAGGTCCAAGCCGGGTTAAGATCATGGTGGTGCCAGGGTTCTTTGTTCAGGATAGGATCTTGAGGTGTAGAGTTATTTGCAGGCACAAATCTGCTCCCTAG 1893 0.4437 MHQLKIHFVLFQLSIKIPSISIFYYTYYLLGIYITCSTLFFPLLCLMAATGTATAKVFQDHNNQRNNGNNPEITREEIQTAIAKAVELRALHAALTHGSSPGTTNARFPSPSPASHFSAQDYPVFTPSYEDEAHHNPTKSRTISESWDENGVEGGNSMAPPDNKEKSSSRKGLPFGFANLDSHMCPADDSKSVSGSCANHITVLQTSPANDYFFRRRNSLGDLKPFSSCNRCNPAVLTSEYENTRNNKSSNTVVPLTDSHASFQTQPKSKGVISWLFPRFKKKHKNVSSPTRTESEEVSQVLKDMGIMSVEALKRELMEANESRDAALMEVSEMRSSLGDLKQKLEYLESYCEELKKALRQAMVTKETTLSEKLNNPPQKGISFDGNGENLMPLGEEVMVEGFLQIVSESRSSVKQFCKTLICQIEETDHSLMDNLNLLLQPYRLSLNTKYSKAVLYHFEAFINQSFYQDFENSVFQKNGCTKFLDPRQDRQAQFSSFVALRNLSWNEVLRKGTKYYSEEFSKFCDQKMSCIITTLNWTRPWPEQLLQAFFVAAKCIWLLHLLAFSFNPPLGILRVEENRSFDPYYMEDLVTDRQRSQGPSRVKIMVVPGFFVQDRILRCRVICRHKSAP 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0395 630 Coils Coil 338 358 - -
Ssu8g0395 630 PANTHER - 47 629 - -
Ssu8g0395 630 Coils Coil 310 330 - -
Ssu8g0395 630 MobiDBLite consensus disorder prediction 127 172 - -
Ssu8g0395 630 PANTHER CYCLIN-DEPENDENT KINASE-LIKE PROTEIN 47 629 IPR042316 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0395 Ssu-Chr8 6352759 6354959 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0395 - - gmx:100786740 1051.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0395 8 6352759 6354959 Ssu8g0395 8 6352759 6354959 ECH
Ssu8g0395 8 6352759 6354959 Ssu3g2713 3 81144564 81147042 PCT