Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2713 ATGGCTGCAGCTGCAACTCCAGCACAGGTTTTCAAAGACTTCAAGGACAGCAACAATGGCAACCCTGAAATTACGAGGCAGGAAATTCAGGCCGCCATAGCCAAAGCAGTGGAGCTAAGAGCTCTTCATGCGGCTTTAATGCGAGGAAATAGCCCAGCCAATGCTAGATTCCCATCTCCTTCCCCTGCTTCGCGCCCTGTTTCTCACTTCTCTGCTCAAGATTACCCTGTTTTCACTCCTAGCTATGAAGATGACCCAATGATGGGGTACAGTCAGAACCCCATGAAAAGCCTATCAGTATCAGAAAGTTGGGATGGGAGTGTGCTAGAAGGAGGAAACAGCATAGAAACCATTGTACCAGATTACAAGGAGAAGTCAAGTTCAAGAAAGGGACTATATGCTGGTTTTGCCAACCTTGAATCTCACGTATGTCCTGCTGATGATAGCAAATCTGTGACGGGCTCCTGTGCAAATCAAATTACTGTTCTTCAAACATCACCTGCAAATGACTACTTCAAGTGTAGGAGGAGAAACAGTTTGGAGGATTTCAAGTCCATATCCTCCTGCAATAAGTGTAACCCTGCCACCATAACTAGTGAATTTGAGAATGCAAGGAACAGCAAGAGCTCCAACATTGTGGTCCCAGTCATGGATTCCCACTCATCTCTTCAATCCCAACCCAAAAGCAAGGGGGTGATTTCTTGGCTGTTTCCTCGGCTAAAGAAGAAGCATAAGAATGAAAATTCCCCTAATAGAGCAGAATCTGAGGATGTCTCTCAGGTTCTTAAGGACTTGGGAATAATGTCAATTGAGACACTGAAGAAGAAGCTGGTGGAAGCAAACGAGAACCGAGATGTGGCCTTAATGGAAGTTTCTGAGATGAGAAATTCATTGGGGGAGCTGAAGCAGAAGCTGGAGTACTTGGAGAGTTACTGTGAAGAGCTGAAGAAAGCTTTGAAGCAAGCCATGCAGACAAAGGATTCACAACTTTGTGACCAACTTAGTAATCTTCCTCAGAGAGGGAAATCATTGGAGGGGAATGGAGAAGATTTGATGCCTGTGAGTGAGGAAGTAATGGTAGAGGGATTCTTGCAGATAGTGTCAGAGTCCAGATTGTCAGTGAAGCAGTTCTGCAAGACCCTTATAAACCACATTGAAGAAACTGATCATTCTTTGACGGAAAATTTGAACTTGCTTCTCCAACCATATAACCTGTCTCTGAATTCCAAGTACTCAAAGGCAGTTCTATACCATTTTGAAGCTTTTATAAATCAGTCTCTCTACCAAGACTTTGAGAATTGTGTTTTCCAAAAGAACGGTTGCTCGAAATTCCTAGACCCCCAGCAGGATCGTCAAGCAAAATTCTCCTCTTTTGTTGCCCTTAGGAATTTGAGCTGGAACGAGGTACTGAGAAAGGGAACAAAGTATTACAGTGAAGAGTTTAGCAAGTTCTGTGACCAGAAAATGAGTTGCATCACCACTAGTCTAAAATGGACAAGGCCTTGGCCTGAACAGCTCCTTCAAGCTTTCTTTGTGGCGGCTAAATGCATGTGGTTGCTACATTTGCTTGCCTTTTCTTTCAACCCCCCGTTGGGAATTTTAAGGGTTGAAGAGAATAAAACCTTTGATCCTCACTACATGGAAGATATGTGTCCGAGGTCACAAGGTCCAAGCAGAGTTAAGATCATGGTGATGCCGGGGTTTTATGTTCAGGATAGGGTGTTGAGGTGTAAAGTCCTTTGCAGGTACAAGTCTGCAACCTAA 1764 0.441 MAAAATPAQVFKDFKDSNNGNPEITRQEIQAAIAKAVELRALHAALMRGNSPANARFPSPSPASRPVSHFSAQDYPVFTPSYEDDPMMGYSQNPMKSLSVSESWDGSVLEGGNSIETIVPDYKEKSSSRKGLYAGFANLESHVCPADDSKSVTGSCANQITVLQTSPANDYFKCRRRNSLEDFKSISSCNKCNPATITSEFENARNSKSSNIVVPVMDSHSSLQSQPKSKGVISWLFPRLKKKHKNENSPNRAESEDVSQVLKDLGIMSIETLKKKLVEANENRDVALMEVSEMRNSLGELKQKLEYLESYCEELKKALKQAMQTKDSQLCDQLSNLPQRGKSLEGNGEDLMPVSEEVMVEGFLQIVSESRLSVKQFCKTLINHIEETDHSLTENLNLLLQPYNLSLNSKYSKAVLYHFEAFINQSLYQDFENCVFQKNGCSKFLDPQQDRQAKFSSFVALRNLSWNEVLRKGTKYYSEEFSKFCDQKMSCITTSLKWTRPWPEQLLQAFFVAAKCMWLLHLLAFSFNPPLGILRVEENKTFDPHYMEDMCPRSQGPSRVKIMVMPGFYVQDRVLRCKVLCRYKSAT 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2713 587 Coils Coil 270 290 - -
Ssu3g2713 587 Coils Coil 298 325 - -
Ssu3g2713 587 PANTHER - 2 586 - -
Ssu3g2713 587 MobiDBLite consensus disorder prediction 1 21 - -
Ssu3g2713 587 PANTHER CYCLIN-DEPENDENT KINASE-LIKE PROTEIN 2 586 IPR042316 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2713 Ssu-Chr3 81144564 81147042 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2713 - - gmx:100814681 1066.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g2713 3 81144564 81147042 Ssu3g2713 3 81144564 81147042 ECH
Ssu8g0395 8 6352759 6354959 Ssu3g2713 3 81144564 81147042 PCT