Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0379 ATGGGGGTTATGTCCAGGCGGGTTGTGCCCGTCTGTGGTAACCTCTGTGTGTTTTGTCCTTCTCTGCGCGCAAGATCAAGGCAACCGGTGAAACGTTACAAGAAGTTGATTGCTGATATATTCCCGCGTAATCAGGTTGCCGAGCCTAATGATAGGAAAATTGGAAAGCTATGTGAGTATGCTTCTAAGAATCCATTGAGAATTCCCAAgATTACTGACAACTTGGAGCAAAGATGTTACAAGGATATGCGTAATGAAAACTTGGATTCAGTGAAAGTGGTGTTGTGCATATACAGGAAATTGTTATCGACATGTAAGGAGCAGATGCCGTTGTTTGCCAATAGTTTATTAGGGATCATTCGGACTCTTCTAGAGCAAACTCGAGCAGATGAAATGCAGATCTTAGGTTGCAATACTCTTGTAGAATTTACCGATTGCCAGACAGATGGTACATACATGTTCAACTTAGAAGGTTTTATACCAAAACTTTGTCAATTGGCTCAAGAAGTGGGAGATAATGAACAAGCTCTGCTTCTACGTTCAGCTGGACTACAAGCTCTCTCCTATATGGTGCAGTTCATGAGCGAGCACTCACATCTTTCAATGGATTTTGACAAAATTATATCAGTGATTTTGGAGAATTTCATGGATCTCCAATCCAAATCCAATCTTGCAAAGGTGGAGAAGCTGAATTCACAATCTCAGAACCAGTTGATCCAAGGATTTCCCAATGAAGGAGACTGTGTACATTCTTTACCAGATATCACTAAGAAGGATCCTTCCTTACTCAATGCTGTGACAGGAACTGAGACAGAGTCCAAGTTGGATACTGCTAAAGATCCTGCTTATTGGTCAAAGGTTTGCTTGTATAATATGGCCAAATTGGCAAAGGAAGCTACAACTGTGCGGCGTGTCCTTGAACcactttttcataattttgataCTGAAAACCACTGGTCTTCTGAAAAGGGAATTGCTTCTTGTGTTTTGATGTATTTGCAATCCCTTCTAGCAGAATCAGGAGATAACTCCCATCTTCTGTTGTCCATTTTGGTCAAGCACTTGGATCATAAGAATGTTGCCAAGCAGCCTATCCTTCGGATTGATATTATTAACACCACCACACAGCTTGCACAAAATGTGAAGCAGCAGGCTTCAGTTGCAATCATTGGTGCAATATCTGACCTCATTAAACATTTAAGGAAATGCCTGCAAAATTTAGCTGAAGCATCCAACATTGGAAATGATGCATATAGGTTGAATACTGAACTTCAGTCTGCCTTAGAAATGTGTATATTACAACTTTCAAACAAGGTTGGGGATATAGGACCAATTCTTGATTTGATGGCTGTGGCACTGGAGAATATCCCAATTACTACCATCATAGCGAGATCAACAATCTCTGCTGTCTATCAAACGGCAAAATTAATCACTGCCATCCCCAATGTGTCATATCACAATAAGGCTTTCCCTGATGCCTTGTTTCATCAATTGCTCCTGGCCATGGCTCATCCTGACCGTGAAACACAAATTGGAGCACATAGTGTCTTCTCTATGGTGCTTATGCCATCCACGTTTTCTCCTTGGTTAGACCACAAAACAAAGATTGCTCAGAAGGCACAGAATGATAGCTTCTCCACTCAGCATGAAACTTTTTCTGGAGCTGAAAACTTGAATGGGAAACTGGAAGAAGGAAAGGCAATAGCCAGTGTCAATGGGAAGAAATATGCAATTCATCCATATCGCAGTTACAGCTTTACTCCTGAGCTAACTGATGGAAAAGatGATCGAAGTTCTCTTAGGCTGAGCAGTCACCAAGTGAGTCTCTTGCTTTCTTCAATCTGGGTTCAGGCAACATCTGTGGAAAATGTCCCTGCAAATTACGAGGCAATGGCACACACCTATAGCATTGCTTTATTATTTACTCGTTCTAAGGCATCGAGTTACATGGCTTTAGTAAGATGTTTCCAACTGGCATTCTCCCTCAGGAGCATCTCTTTGGACCAAGAAGGAGGTTTACAACCATCTCGCAGGAGGTCCCTTTTTACCTTGGCTTCATACATGCTTCTCTTCTCTGCCAGGGCTGGCATTGTCCCTGATCTAATTCCAAAAGTTAAAGCTTCACTGACAGAGACAAcaGTAGATCCTTTTCTTGAATTGATCGATGATGTCCGGCTGCAGGCTGTCTGTATAGAATCAGAGAAGATAATTTATGGATCTCAGGAGGATGAGGTTGCTGCTGTGAAGTCTCTTTCAGCTGTAGAATTGGATGACAAGCAGTTGAAAGAAACTGTAATATTGTACTTTAtgactaaattttcaaaattgtccgAGGATGAATTGTCTAGCATAAAGAATCAACTTCTACAGGGTTTTTCCCCTGATGATGCATATCCATTGGGACCTCCATTATTTATGGAGACACCAAGACCATGTTCTCCACTTGCTCAGATAGAGTTCCCAAATTTTGACGAGATAATGGTTCTGGATGATTTGATGGATGAAGAGACTGGACCTGAACCAAGTGGAAGTCAGTCAGATCGCAAAACATCACTCTCAACCAACAACCCTGATGTTCTAAGTGTTAATCAACTATTGGATTCAGTTTTGGAAACTGCACGGCAAGTTGCAAGTTTCTCCACTTCCTCAACTCCTTTACCTTATGATCAAATGAAGAACCAGTGCGAGGCACTTGTAACAGGGAAACAACAGAAGATGTCAGTCATTCACAGTTTCAAGCAACAACAGGAGAGTAAGGCCATAATTCTTTCGAGTGAAATTGAAGTAGAAGTTTCCCCTCTACCTGCTAAGGCACTGGAATATTCAAAAGGTGATTTGAAGTTAGTGACCCAGCAGCAATTTCAAGCTCAGGATCAAGCACGATACCGTTCTCATGACTCTGGGCAGCAACATTCTTTGAGATTACCACCTTCGAGCCCCTATGATAAATTCTTGAAAGCTGCGGGATGCTAA 2973 0.412 MGVMSRRVVPVCGNLCVFCPSLRARSRQPVKRYKKLIADIFPRNQVAEPNDRKIGKLCEYASKNPLRIPKITDNLEQRCYKDMRNENLDSVKVVLCIYRKLLSTCKEQMPLFANSLLGIIRTLLEQTRADEMQILGCNTLVEFTDCQTDGTYMFNLEGFIPKLCQLAQEVGDNEQALLLRSAGLQALSYMVQFMSEHSHLSMDFDKIISVILENFMDLQSKSNLAKVEKLNSQSQNQLIQGFPNEGDCVHSLPDITKKDPSLLNAVTGTETESKLDTAKDPAYWSKVCLYNMAKLAKEATTVRRVLEPLFHNFDTENHWSSEKGIASCVLMYLQSLLAESGDNSHLLLSILVKHLDHKNVAKQPILRIDIINTTTQLAQNVKQQASVAIIGAISDLIKHLRKCLQNLAEASNIGNDAYRLNTELQSALEMCILQLSNKVGDIGPILDLMAVALENIPITTIIARSTISAVYQTAKLITAIPNVSYHNKAFPDALFHQLLLAMAHPDRETQIGAHSVFSMVLMPSTFSPWLDHKTKIAQKAQNDSFSTQHETFSGAENLNGKLEEGKAIASVNGKKYAIHPYRSYSFTPELTDGKDDRSSLRLSSHQVSLLLSSIWVQATSVENVPANYEAMAHTYSIALLFTRSKASSYMALVRCFQLAFSLRSISLDQEGGLQPSRRRSLFTLASYMLLFSARAGIVPDLIPKVKASLTETTVDPFLELIDDVRLQAVCIESEKIIYGSQEDEVAAVKSLSAVELDDKQLKETVILYFMTKFSKLSEDELSSIKNQLLQGFSPDDAYPLGPPLFMETPRPCSPLAQIEFPNFDEIMVLDDLMDEETGPEPSGSQSDRKTSLSTNNPDVLSVNQLLDSVLETARQVASFSTSSTPLPYDQMKNQCEALVTGKQQKMSVIHSFKQQQESKAIILSSEIEVEVSPLPAKALEYSKGDLKLVTQQQFQAQDQARYRSHDSGQQHSLRLPPSSPYDKFLKAAGC 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0379 990 MobiDBLite consensus disorder prediction 960 981 - -
Ssu8g0379 990 PANTHER CYCLIN-LIKE PROTEIN 1 990 - -
Ssu8g0379 990 MobiDBLite consensus disorder prediction 834 857 - -
Ssu8g0379 990 PANTHER PUTATIVE, EXPRESSED-RELATED 1 990 - -
Ssu8g0379 990 SUPERFAMILY ARM repeat 56 779 IPR016024 -
Ssu8g0379 990 MobiDBLite consensus disorder prediction 839 857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0379 Ssu-Chr8 5988283 5998792 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0379 K21842 - gmx:100806860 1717.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0379 8 5988283 5998792 Ssu3g2734 3 81535813 81546134 PCT