Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2734 ATGGGGGTTATGTCCAGGCGGGTTGTGCCCGTCTGTGGCAACCTCTGTTGTATCTGTCCTGCTCTGCGGGCAAGCTCCAGACAACCGGTGAAACGTTACAAGAAGTTGCTAGCTGATATTTTCCCACGCAATCAGGAGGCTGAACCTAATGACAGAAAAATTGGAAAACTATGTGACTATGCTTCTAAGAATCCACTGAGAATTCCCAAGATTACTGATAACTTGGAGCAAATATGTTTCAAGGATTTGCGTTATGAAGCCTTTGGCTCAGTGAAAGTTGTCTTGTGCATATACAGGAAATTCTTATCGTCGTGTAAGGAGCAGATGCCGCTTTTTGCTGGTAGTTTGTTAGAGATCATTCGGACTCTTCTAGATCAAACACGAACAGATGAAATCAGGATCTTAGGCTGCAACACTCTTTTTGATTTTATAGATTGCCAGaCAGATGGTACATACATGTTCAACTTAGAGGGTTTTATTCCTAAACTATGTCAATTGGCTCAAGAAGTGGGGGAAGACGAACGAGCTCTGCAGCTACGTTCAGCTGGACTACAAGCTTTATCCTATATGGTGCGTTTCATGGGTGAGCACTCACATCTTTCCATGGATTTGGATGACattatatcAGTGACTTTGGAGAATTACACGAGTCTCAAGTCTAACTCCAAACCTGCCATAGAAGATAAACTGAATTCAGAGTCCCTGGACCTGTTAGTACAGGGATTTCCTAAAGTAGAAGCCCCTCTAACAGATATCACTAAGAAGGATCCTTTGTTGCTGAAAGCTGTGACTGGAACTGAGATTGACTCTGTGTTGGATACTGCTAAAGATCCTACATATTGGTCAAAGGTTTGCTTGTATAATATGGTCAAATTGGCAAGGGAAGCTACAACTTTACGGCGTGTCCTTGAAcctctttttcattattttgatactgAAAATCAATGGTCTTCTGAAAAAGGAGTTGCTGCTCATGTTTTGACGTACTTGCAATCTCTTTTAGCAGAATCAGGAGATAACTCTTGTCTTCTGTTGTCCATTTTGGTCAAGCACTTGGATCATAAGAATGTTGCTAAGCAGCCTATCCTTcagattaatattattaatactacaACAAAACTTGCACAAAATGTGAAGCAACAGGCTTCGGTTGCAATTCTTGGTGCAATATCTGACCTCATTAAACATTTAAGGAAGTGTCTGCAAAATTCAGTTGAAGCTTCCAGCATTGGAAATGATGGGTTTAAGTTGAATACTGAACTTCAAATTGCCTTGGAAATGTGTATATTACATCTTTCCAACAAGGTTGGGGATGTAGGACCCATTCTTGATTTAATGGCTGTGGTGTTAGAGAATATCTCGACTACAACCATCATAGCAAGAACAACAATCTCTGCTGTTTATCAAACTGCAAAATTAATCACATCCATCCCTAATGTATCATATCACAGGAAGGCTTTCCCTGATGCTTTGTTTCATCAATTGCTCCTGGTGATGGCTTATCCTGACCATGAAACACGAGTTGGAGCACACAGTGTCTTCTCTATAGTGCTTTTCCCATTTCCATTTTCTCCCCGGTTAGAACAGAAAACAAAGATGTCTCCAAAGGTACCAAGTGAAACCTTCTCCTTTCAGCATGAAAGCTTTCTAGGAGCAGAACAGGTCAATGGGGAACCTATGGAAGGAAAGGCAGTAGTTGGTGTTAGTGGGAAATATGCAGTTCATCCATATCATGGTTACATCTTTTCTGGTGCTCTAACTGATGGAAAACatgAGCTAAGTTCTTTTCGATTGAGCAGTCATCAAGTGAGTCTCTTGCTTTCTTCAATCTGGGTTCAGGCAACATCTTTGGACAGTGGCCCTGCAAATTATGAGGCAATGGCTCACACTTATAGTATTGCTTTATTGTTCACTCGTTCAAAGACATCCAGTTACATGGCTTTAGTACGATGTTTCCAACTAGCATTTTCCCTCATGAACCTCTCTTTGGACCGCAAAGGAGGTTTACAACCATCTCACAGGAGGTCTCTTTTTACCTTGGCATCGTACATGCTTATATTCTCAGCCAGGGCAGGCAATTTCCCTGAGCTAATTCCAAAAGTTAAAGCATCCTTGACAGAGACAACTGTAGATCCTTTTCTTGAGTTGGTCGATGATGTCAGGCTGCAGGCTGTTTATATAGAATCAGAGAAGATAATTTATGGATCTCAGGAAGATGATGTTTCAGCTATGAAGTCACTGTCAGCAGTAAAATTGGATGACAAGCAATTGAAAGAGACTGTAATATCATGTTTCCtgactaaattttcaaaattatcagAGGATGAATTGTCAAGCATGAAGAAACAACTTGTACAGGGCTTTTCCCCTGATGATGCATATCCACTGGGGCTTCCATTGTTTATGGAGACACCAAGGCTGTCTTCTCCACTTGCTCAGATTGAGTTCCCAGATTGTGACGAGATTGTGGGTCCAGTAGCTTTGATAGATGAAGAGACCAGGCCCGAACCAAGTGGAAGTCAGTCAGATCGTAAATCATCACTATCTAGCAACAGCCTGGACATTCTAAGTGTTAATCAACTCTTACAATCGGTTTTGGAAACCGCACGACAAGTGGCGAGTTTCCCCATTTCCTCAACTCCTGTACCTTATGACCAAATGAAGAACCAGTGTGAGGCACTTGTAATGGGGAAACAACAGAAGATGTCAGTTCTTCACAGTTTCAAGCACCAGCAGGAAACTAGGGCAATAGTTCTTTCaagtgaaaatgaaatgaaagtttcCCCTCTGCCAATTAAGACACTGGAGTATTCAGAAGGTGATCTGAAGTTAGTGAGCCAGGAGCAATTTCCAGCACAATATCAAGTTCGCCTCTGTTCATATGACTTGGGACAGCAATATTCTTTGAAACTACCACCTGCAAGCCCCTATGATAAATTCTTGAAAGCTGCTGGATGCTAA 2961 0.4059 MGVMSRRVVPVCGNLCCICPALRASSRQPVKRYKKLLADIFPRNQEAEPNDRKIGKLCDYASKNPLRIPKITDNLEQICFKDLRYEAFGSVKVVLCIYRKFLSSCKEQMPLFAGSLLEIIRTLLDQTRTDEIRILGCNTLFDFIDCQTDGTYMFNLEGFIPKLCQLAQEVGEDERALQLRSAGLQALSYMVRFMGEHSHLSMDLDDIISVTLENYTSLKSNSKPAIEDKLNSESLDLLVQGFPKVEAPLTDITKKDPLLLKAVTGTEIDSVLDTAKDPTYWSKVCLYNMVKLAREATTLRRVLEPLFHYFDTENQWSSEKGVAAHVLTYLQSLLAESGDNSCLLLSILVKHLDHKNVAKQPILQINIINTTTKLAQNVKQQASVAILGAISDLIKHLRKCLQNSVEASSIGNDGFKLNTELQIALEMCILHLSNKVGDVGPILDLMAVVLENISTTTIIARTTISAVYQTAKLITSIPNVSYHRKAFPDALFHQLLLVMAYPDHETRVGAHSVFSIVLFPFPFSPRLEQKTKMSPKVPSETFSFQHESFLGAEQVNGEPMEGKAVVGVSGKYAVHPYHGYIFSGALTDGKHELSSFRLSSHQVSLLLSSIWVQATSLDSGPANYEAMAHTYSIALLFTRSKTSSYMALVRCFQLAFSLMNLSLDRKGGLQPSHRRSLFTLASYMLIFSARAGNFPELIPKVKASLTETTVDPFLELVDDVRLQAVYIESEKIIYGSQEDDVSAMKSLSAVKLDDKQLKETVISCFLTKFSKLSEDELSSMKKQLVQGFSPDDAYPLGLPLFMETPRLSSPLAQIEFPDCDEIVGPVALIDEETRPEPSGSQSDRKSSLSSNSLDILSVNQLLQSVLETARQVASFPISSTPVPYDQMKNQCEALVMGKQQKMSVLHSFKHQQETRAIVLSSENEMKVSPLPIKTLEYSEGDLKLVSQEQFPAQYQVRLCSYDLGQQYSLKLPPASPYDKFLKAAGC 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2734 986 PANTHER PUTATIVE, EXPRESSED-RELATED 1 986 - -
Ssu3g2734 986 SUPERFAMILY ARM repeat 61 719 IPR016024 -
Ssu3g2734 986 PANTHER CYCLIN-LIKE PROTEIN 1 986 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2734 Ssu-Chr3 81535813 81546134 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2734 K21842 - gmx:100799047 1732.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0379 8 5988283 5998792 Ssu3g2734 3 81535813 81546134 PCT