Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0358 ATGCAGATGCTCTGTAAGGCTTCATCTGCTATGGCCACTTTTCCTTGCTCCAGGGTGAGAAGTGGGTTGTGCGTATGGCCAGATGTGAGACAACTTTGCTTTAGAAAAGGCATTCTATATGGATTTATGCGATTGTTTTCTACGCCGTTGAAAACACTGCGTGGAGCTAGTCGTTCATTGAGAGTAGCTCAGTTTTGCAGTGTTGTCAATATGTCTTCCTCATTGCAGATTGAATTGgtaCCTTGCCTGAAGGACAATTATGCGTATCTTTTACATGATGTGGATACGGGTACAGTTGGTGTTGTTGATCCCTCTGAAGCTGTGCCTGTCATAGGTGCCTTGAGCAGGAAAAATCGAAATTTGACATACATACTCAACACTCACCATCATCTTGATCACACTGGTGGGAATGTAGAATTGAAAGCAAGATACGGGGCAAAGGTGATTGGTTCAGGAACTGACAAGGAAAGAATTCCTGGCATTGATATCCATTTGAATGATGGTGATAAGTGGATGTTTGCTGGCCATGAGGTGCATGTAATGGACACACCTGGTCACACCCGAGGCCATATAAGCTTCTATTTTCCTGGATCTGGGGCAATTTTTACCGGAGACACTTTGTTCAGCTTATCATGTGGGAAGCTCTTTGAAGGAAGCCCACAGCAGATGCAATCTTCTCTTAGAAAGATCATGTCTTTGCCAGATGATACAAATATATACTGCGGACACGAGTATACATTGAGTAATACAAAGTTTGCATTGTCTGTCGAACCCGAAAACGAGGAACTTCAATCCTATGCTGCTCACGTAGCTTACCTTCGAAGTAAAGGCTTGCCTACGATTCCCACCACACTGAAGATGGAAAAGGCCTGTAATCCATTCCTTCGTACATCCAGTGCTGCAATCCGGCAATCATTGAACATTGCAGCCACAGCAAATGATGCAGAAGCCTTGGGTGTCATCCGGCGAGCAAAggataatttttag 987 0.4377 MQMLCKASSAMATFPCSRVRSGLCVWPDVRQLCFRKGILYGFMRLFSTPLKTLRGASRSLRVAQFCSVVNMSSSLQIELVPCLKDNYAYLLHDVDTGTVGVVDPSEAVPVIGALSRKNRNLTYILNTHHHLDHTGGNVELKARYGAKVIGSGTDKERIPGIDIHLNDGDKWMFAGHEVHVMDTPGHTRGHISFYFPGSGAIFTGDTLFSLSCGKLFEGSPQQMQSSLRKIMSLPDDTNIYCGHEYTLSNTKFALSVEPENEELQSYAAHVAYLRSKGLPTIPTTLKMEKACNPFLRTSSAAIRQSLNIAATANDAEALGVIRRAKDNF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0358 328 PANTHER HYDROXYACYLGLUTATHIONE HYDROLASE 3 328 - -
Ssu8g0358 328 Gene3D - 75 328 IPR036866 -
Ssu8g0358 328 SUPERFAMILY Metallo-hydrolase/oxidoreductase 75 327 IPR036866 -
Ssu8g0358 328 TIGRFAM GSH_gloB: hydroxyacylglutathione hydrolase 78 328 IPR017782 GO:0004416|GO:0019243
Ssu8g0358 328 PANTHER BETA LACTAMASE DOMAIN 3 328 - -
Ssu8g0358 328 CDD hydroxyacylglutathione_hydrolase_MBL-fold 80 243 IPR035680 -
Ssu8g0358 328 SMART Lactamase_B_5a 85 243 IPR001279 -
Ssu8g0358 328 Hamap Hydroxyacylglutathione hydrolase [gloB]. 75 328 IPR017782 GO:0004416|GO:0019243
Ssu8g0358 328 Pfam Metallo-beta-lactamase superfamily 88 243 IPR001279 -
Ssu8g0358 328 Pfam Hydroxyacylglutathione hydrolase C-terminus 244 328 IPR032282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0358 Ssu-Chr8 5811740 5816456 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0358 K01069 - gmx:100816314 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0358 8 5811740 5816456 Ssu3g2753 3 81826386 81829537 PCT