Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2753 ATGAGTGATAGCAagGTAAGAAGTGGGTTTTGCGTGTGGCCTGATGCGAGACAACTTTGCTTAAGGAAAGGTCTTCTATATGGATTTATGCGATTATTTTCTATACCATTAAAAACATTGCGTGGAGCTAGTCGGTCATTGAGAGTAGACCAATTTTGCAGTGTAGTGAATCTATCTTCCTCATTGCAGATAGAATTGgtTCCATGCCTTAGGGACAATTATGCATATCTTTTACATGATGTGGATACGGGGACAGTTGGTGTTGTTGATCCTTCTGAAGCTGCACCTATTGTAGATGCGTTGAGtaagaaaaatctaaatttgACATACATACTGAACACCCACCACCATCATGATCATACTGGTGGAAATGCAGAGTTGAAAGAAAGGTATGGGGCAAagGTAATTGGTTCAGAAATAGACAAGGAAAGAATTCCTGGCATTGATATCTATTTGAGTGATGAAGATAACTGGATGTTTGCAGGCCATGAGGTGCATGTATTGGCCACACCTGGTCACACCGAAGGTCATGTAAGCTTCTACTTTCCGGGATCTGGGGCAATTTTTACTGGAGACACCTTGTTCAGCTTATCATGTGGCAAGCTCTTTGAAGTAACCCCCAAGCAGATGCTATCTTCTCTTAAAAGGATCATGTCTTTGCCAGATGATACAAGTATTTACTGTGGTCATGAATATACATCGAGTAATTCAAAGTTTGCCTTGTCTATAGAACCTGAAAACAAGGAACTTCAATCCTATGCTGCCCATGTAGCTCACCTAAGAAATAAGGGCTTGCCCACGGTAATTTTCAGAATGGAGCTTCTTTAA 828 0.401 MSDSKVRSGFCVWPDARQLCLRKGLLYGFMRLFSIPLKTLRGASRSLRVDQFCSVVNLSSSLQIELVPCLRDNYAYLLHDVDTGTVGVVDPSEAAPIVDALSKKNLNLTYILNTHHHHDHTGGNAELKERYGAKVIGSEIDKERIPGIDIYLSDEDNWMFAGHEVHVLATPGHTEGHVSFYFPGSGAIFTGDTLFSLSCGKLFEVTPKQMLSSLKRIMSLPDDTSIYCGHEYTSSNSKFALSIEPENKELQSYAAHVAHLRNKGLPTVIFRMELL 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2753 275 TIGRFAM GSH_gloB: hydroxyacylglutathione hydrolase 65 268 IPR017782 GO:0004416|GO:0019243
Ssu3g2753 275 Hamap Hydroxyacylglutathione hydrolase [gloB]. 62 275 IPR017782 GO:0004416|GO:0019243
Ssu3g2753 275 PANTHER HYDROXYACYLGLUTATHIONE HYDROLASE 2 269 - -
Ssu3g2753 275 CDD hydroxyacylglutathione_hydrolase_MBL-fold 67 230 IPR035680 -
Ssu3g2753 275 Pfam Hydroxyacylglutathione hydrolase C-terminus 231 273 IPR032282 -
Ssu3g2753 275 Gene3D - 62 274 IPR036866 -
Ssu3g2753 275 SMART Lactamase_B_5a 72 230 IPR001279 -
Ssu3g2753 275 Pfam Metallo-beta-lactamase superfamily 75 230 IPR001279 -
Ssu3g2753 275 PANTHER BETA LACTAMASE DOMAIN 2 269 - -
Ssu3g2753 275 SUPERFAMILY Metallo-hydrolase/oxidoreductase 62 269 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2753 Ssu-Chr3 81826386 81829537 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2753 K01069 - gmx:100777052 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0358 8 5811740 5816456 Ssu3g2753 3 81826386 81829537 PCT