Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0352 ATGGTCATAGCCAACGGCACCAACGGCCTAGTATCTATTATAGTGCTTGTAGTTTTGATTTTCCCAGTAGTTGCAGCACAAGCACTCTCACCCGGTGATTCTGTGGCAGATAATGTCTCAGAAGCCATTAGACAACCGGATAATACTATTAGAGTGGATCCTTTAGATAATTTCGAAAAATACAGAGGAGGATTTAACATCACCAACAAGCATTATTGGAGTtcgGTGATCTTCACTGGAGTATATGGATATGTAATTGGGGTGCTCTGCCTTTTGTGTGGAATCGTGTATGGAAGTTTTTTGGTAATAACCATGATTTATCACAAAAATGACCGAGGAAGAAGGATGAAGAAGGTCTTTCCTTGTAATTACAAAAGTTGTGATCTTTCACTAATTCCTTTGGCTATATTGCTCACCATTTTTGCTATAGCTGCTACTGGGCTAGTTCTTGCTGGGAGTGCAAAGTTCCATTCTGAAGCGAAAACTTCggttaatattataatcaagACAGCAAATGAGGCATCGGAAACGATACACAACACAACAGGAGCGTTAAAAGACATGGAAAGTAACTTTATGGAAGCCAATGTTAATGCTGAGGCTTCGGTAATTCTTGACTCTACAACCCAGAGACTTGATGATGCATCTGCAAACATTGAGAAGCAAGCTAGGAAGAATAGGCGCCTTATTAACAAGGGCTTGAAACTAGTGATTGTAATTACCACCATGATTATAAGCTTGAACTTAGTTGCTGTAACAGCTTTGTCAGTTTCTGGAGTACTGAGGTTACGGCGGGCACTGTACCTGCTTGTCGTATTATGCTGGTTGATGACAGTGATATGTTGGCTATTCTTTGGAGTATATTTCTTAGAAAAATTTTCTAGTGATGCATGCACAGCTCTTGACAACTTTCAAGAAAATCCCTATAACAACAGCCTAAGTTCAATCCTCCCTTGTGATGAATTGCTCACGGCAAAATCAGTTCTATCTAATGTTAGTGCTGGGATCTACGACCTTGTTAACGAGGTGAATGCAAACATATCAGCCCTGCAGGCAACATCAGATGTCAGTCTTGTTCATGTTTGCAACCCCTTCTCAGCTCCACCCAAGTATTTATACCAGCCAGAGAACTGCCCTGCTAACACTATCCGAATAGGAGACATCCCAAAGGTATTGAAGCCTTTTACCTGTTTGGATGCCAATGATGGAACCTGTGACAATGGATACTTCATTCCCGGCAGTGACTACGCGAGAGTCGAGGCTTACACAAGTTCAATTCAGGACCTACTGAACGTGTATCCCAGTATGGAGCACTTGTTGGAATGCCAAGTGGTAAAAGATGCATTCTCTCAAGTCCTTGTCCAACACTGCAAGCCTCTGAAGAAATATGCTCGGATGGTATGGATAGGAATGCTGTTTCTTGCAGTGATCATGGTGTTGTTGGTTGTACTATGGACTATAAAAGCTCGTCACGAACACCGTTATCATCTTTCAGATGGTTCTGTGGGGCCCCATTGTGCACCAACCATAGCCTTGGAATCGGGACCAGTTAAAGAGATTGAGATTTGA 1569 0.4168 MVIANGTNGLVSIIVLVVLIFPVVAAQALSPGDSVADNVSEAIRQPDNTIRVDPLDNFEKYRGGFNITNKHYWSSVIFTGVYGYVIGVLCLLCGIVYGSFLVITMIYHKNDRGRRMKKVFPCNYKSCDLSLIPLAILLTIFAIAATGLVLAGSAKFHSEAKTSVNIIIKTANEASETIHNTTGALKDMESNFMEANVNAEASVILDSTTQRLDDASANIEKQARKNRRLINKGLKLVIVITTMIISLNLVAVTALSVSGVLRLRRALYLLVVLCWLMTVICWLFFGVYFLEKFSSDACTALDNFQENPYNNSLSSILPCDELLTAKSVLSNVSAGIYDLVNEVNANISALQATSDVSLVHVCNPFSAPPKYLYQPENCPANTIRIGDIPKVLKPFTCLDANDGTCDNGYFIPGSDYARVEAYTSSIQDLLNVYPSMEHLLECQVVKDAFSQVLVQHCKPLKKYARMVWIGMLFLAVIMVLLVVLWTIKARHEHRYHLSDGSVGPHCAPTIALESGPVKEIEI 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0352 522 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 21 514 IPR040283 -
Ssu8g0352 522 Coils Coil 205 232 - -
Ssu8g0352 522 PANTHER OS11G0264500 PROTEIN 21 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0352 Ssu-Chr8 5742403 5746434 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0352 - - gmx:100805495 878.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0352 8 5742403 5746434 Ssu3g2758 3 81875209 81881580 PCT