Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g2758 atGGCTAAACGTCAGCAGCAAATCTCCATATTGGTTTATGATCGAAAAGTTTATCGGGTAAAGTCGTTTCAAAAGACTGCacgtatatatGTTAAAGATGGCCATCCCCAAAGGCACCACCCGTGGCCTAGCatctattattttgattatagcATTGATTCTTCCCAAAACTGCAGCACAATCCCCCAATGGTTCCGTTGCAATCAGTTGTCTTCACAGGAGTATATGGATATGCAATCGGGGGTTGCTAGTGGGTTAGTTTATGTTGGGAGTGCAAAATTCTATTCTCAAGCAAGGACTTCAGTTAATGTTGTAATCAAGATAGCAGATGACGAATCAGAAATCATACACAACGCAACAAGTGCATTAGAAGACATCCAAGAAGACTTGGTGGAACCCAGTATTAGTGATGAGGTTTCTGGAAATCTTAACTCTATGGCTAAGAAATTAGATAATGCTGTTGATGATATCGTAAAGAAAACTAGGAAAAATAGGCGCACTGTTAACAAGGCTTTCAAAGTAGTGTTTATGATAACCATTGTGATCATAAGCTTGAATTTAGTTACAATACCAATTTTGGCAGTTTTTGGAGTAAAGATGTTTTGGAGGCCATTTCACCTATTTGTCATACTGTGCTGGCTGATGACGGTGATATGCTGGCTAATCTTTGGATTGTATTTCTTCTTAGAAAATTTTTCTAATGATACGTGCACAGTTCTTTACAACTTTGAAGAAAATCCCTACAATAACAGCCTAACCTCCATCCTCCCTTGTGATGAATTGCGCTCAGCAAAATCAATTCTACATGAAATTGGTGCAGGGATCTCCAACCTTGTCAATGAGGTGAATGCAAACGTGGGGAGTTTGTTTCCAAACCATGTTTATGTGTGCAATCCTTTCTCAGCACCACCTGAATATTTATATCAGCCAGAGCATTGCCCACCTAATAGTATTCAAATAGGAGATATCCCGAAGGTACTGAAGCCTTATACTTGTTTTGATGATAGTGATGAAAAATGTGGCAGTGAAGATTTCTTAAATGGTGGTGAATATGAAGTAGTTGAGTCTTGCACAAGTTCAATTCAGAACCTACTGAATATGTTTCCTAATATGGAACGATTGATAGGATGCCAGTTGGTAAAAGATGCATTCTCTCAAGTCCTTCTAAGACACTGCAAGCCTTTGAAGAAATTTGCCCGGATGGCATGGCTAGGAATGGTGTTTCTTGCGGTGTTAATGGTGTTTTTTGTTGTGCTGTGTACAATAAAGGCTTGTCAAGAGCATAGTTATCATACTTCAGATTGTTCTGTGTAA 1314 0.3836 MAKRQQQISILVYDRKVYRVKSFQKTARIYVKDGHPQRHHPWPSIYYFDYSIDSSQNCSTIPQWFRCNQLSSQEYMDMQSGVASGLVYVGSAKFYSQARTSVNVVIKIADDESEIIHNATSALEDIQEDLVEPSISDEVSGNLNSMAKKLDNAVDDIVKKTRKNRRTVNKAFKVVFMITIVIISLNLVTIPILAVFGVKMFWRPFHLFVILCWLMTVICWLIFGLYFFLENFSNDTCTVLYNFEENPYNNSLTSILPCDELRSAKSILHEIGAGISNLVNEVNANVGSLFPNHVYVCNPFSAPPEYLYQPEHCPPNSIQIGDIPKVLKPYTCFDDSDEKCGSEDFLNGGEYEVVESCTSSIQNLLNMFPNMERLIGCQLVKDAFSQVLLRHCKPLKKFARMAWLGMVFLAVLMVFFVVLCTIKACQEHSYHTSDCSV 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g2758 437 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 82 437 IPR040283 -
Ssu3g2758 437 PANTHER OS11G0264500 PROTEIN 82 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g2758 Ssu-Chr3 81875209 81881580 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g2758 - - pvu:PHAVU_011G052700g 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0352 8 5742403 5746434 Ssu3g2758 3 81875209 81881580 PCT