Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0319 ATGATGGCTGCTAAGGTGGGACAAGGTTTGTCCAAAGATGACAAGGCACAGAAATTAGCACTAAGGCACTGGCTTGAAGCTATTGATCCCCGTCATCGTTATGGGCACAATCTTCATTTCTACTATGAAGTCTGGTTTCGTAGCCAGAGTTATCAACCTTTTTTCTACTGGTTGGATGTTGGAGATGGCAAGGAAGTAAATCTTGAAACATGTCCTAGAAGGCAATTACAGAGGCAGTGCATAAAGTACCTTGGACCCAAGGAGAGGGAAGCATATGAAGTGATTGTGGAGGGAGGCAGGCTTGTTTATAGACAGAGCAAGGACCTTGTACACACTACTGAGGAATCCAAATGGATTTTTGTCCTTAGCACATCTAGAATTTTGTACGTTGGGCAGAAGAAGAAAGGCCAATTTCAGCACTCTAGTTTTCTAGCCGGTGGTGCTACCATTGCATCCGGAAGATTGGTTGCCCAAAATGGAGTTCTTCACGCTATATGGCCATATAGCGGTCACTACCGTCCAACAGAGAAGAATTTTATGGAATTCATTTGCTTCTTGGAGGAACACAAAGTGGATATGACAAATGTAAAGAAATGTCCAGTTGATGAAGATGTCCCACCTCCTAATCCTGTCAATGAGGAACTGCCGTTTGAGTTCATAGAAGGCAACGAGGGTTTCAGCGACTCTGCCACTGCCAATAATTATGGTAAAGAAAACGTGGGTCACTTTGGTAGCAATGTGGAAGCTTCACTTGAAGAGAACAAGCCAATGTCAAGCAAATGGACTACTGGAGTTGGCCCTCGGATTGGTTGTGTGAGGGAGCACCCAAAAAATTCCGAGATCCAGCACTGGAACAGCTCAATCTTTCACCAAGAGTCAACCATGGAACATTTGCAGGCAAAGCACCCATTCCCTCTCCGAGGCCTAGTACAAAACACTTGTCGCCTAGGCTTGTGA 957 0.4504 MMAAKVGQGLSKDDKAQKLALRHWLEAIDPRHRYGHNLHFYYEVWFRSQSYQPFFYWLDVGDGKEVNLETCPRRQLQRQCIKYLGPKEREAYEVIVEGGRLVYRQSKDLVHTTEESKWIFVLSTSRILYVGQKKKGQFQHSSFLAGGATIASGRLVAQNGVLHAIWPYSGHYRPTEKNFMEFICFLEEHKVDMTNVKKCPVDEDVPPPNPVNEELPFEFIEGNEGFSDSATANNYGKENVGHFGSNVEASLEENKPMSSKWTTGVGPRIGCVREHPKNSEIQHWNSSIFHQESTMEHLQAKHPFPLRGLVQNTCRLGL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0319 318 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 1 284 IPR044159 -
Ssu8g0319 318 PANTHER CALMODULIN-BINDING FAMILY PROTEIN 1 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0319 Ssu-Chr8 5328084 5330685 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0319 - - gmx:100780310 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0319 8 5328084 5330685 Ssu8g0319 8 5328084 5330685 ECH
Ssu4g3219 4 81495531 81499456 Ssu8g0319 8 5328084 5330685 PCT