Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3219 ATGGTAGCAACAGTAAGGCCCGTGGACTATGAGTCAAAGGAGGGAGAGATCACATTCAGAACAATGAGCTTCAACAAGTGCAGAAATCTTGATGAGTTGTATAAACCTGATGAGTTGGATGAGGTTATTACTGAAAAATCTACAAGCTCAAAGAGAAGGAGAGTGGGGAATCTGAAGCTGCAAACCACATTCTCTTTCAAATATCTACTTTCTGATCATTCTGGTTCGAAGGAGGGAGTTGATGGTTTGCTCAATGAACAAAGCCCCACAATTGTGCTATCAAAACCCGAAATTATGTTTTCACCAAGGTCCATTGGGGAGCTTGAAGTGGCTGCAACAAAGCTGCAGAAGGTTTATAAGAGCTACAGGACTAGAAGAACTCTGGCAGATTGTGCAGTTGTTTGCGAAGAGCTATGGTGGAAAGCTTTGGACTTTGTTGCTCTTAGCCGGTGTTCCACATCACATTTTGACTCTGGAAAATCAGAAACGGCTGTTTCAAAATGGGCAAGGGCTAGGACCATGGCTGCTAAGGTGGGAAAAGGTTTGTGCAAAGATGATAAGGCGCAGAAATTAGCTCTAAGGCACTGGCTTGAAGCTATTGATCCACGTCATCGTTATGGGCACAATCTGCACCTATACTATGATGTTTGGTTTCACAGCCAGAGTTCACAACCTTTTTTCTACtgGTTGGATGTTGGAGACGGAAAAGAAGTAAATCTTGAGGAGTGCCCAAGAAATGAATTGCATAGGCAGTGCATAAAGTATCTTGGACCCAAAGAAAGGGAAGCATATGAAGTGATTGTTGAGGGAGGAAggcttatttatagaaaaagtcaGAACCTTGTGCACACTGTTGAGGGATCTAAATGGATTTTCGTTCTTAGCTCTTCTAGAATTTTGTACGTTggggagaaaaagaaaggcCAATTTCAGCACTCAAGTTTTTTAGCTGGGGGTGCTACTATTGCTTCTGGAAGATTGGTGGCCCGAAATGGAGTTCTTGATGCGATATGGCCCTACAGCGGTCATTACTGTCCTACAAAGAAGAACTTTATGGAATTCATTGGCTTCTTGATGGAACATAACGTGGACTTGACAAATGTAAAGAAGTATGCAACTGATGATGATATCCCACCTACAAAACCTGTGGATGAGGAGCTACAGTTTGAGTCCAAAAAGGCTAACAATGCTAGTTCAAGTGACTTTGGGCCTGCCAAAAATTGCACTCAAGATAATATGGGTCACTCTGGTATCAATATGAAAACTTCACAACTTAAAGAGAGCAAGCCATTGTCAAGAAAATGGACTACTGGAGCTGGTCCTAGGATTGGTTGTGTGAGAGAGTACCCTGCAAAACTCCAAGCCAAGGCACTTGAACAACTCAATCTATCACCTAGAGTCAACCTGGGAAAAGTTGCTGCCAAGGCACCCATTCCCTCACCAAGGCCTAGTCCAAAAATTCACCTATCCCCTAGACTTGTGCACATGGGAATTCCCAGCTCATGA 1506 0.421 MVATVRPVDYESKEGEITFRTMSFNKCRNLDELYKPDELDEVITEKSTSSKRRRVGNLKLQTTFSFKYLLSDHSGSKEGVDGLLNEQSPTIVLSKPEIMFSPRSIGELEVAATKLQKVYKSYRTRRTLADCAVVCEELWWKALDFVALSRCSTSHFDSGKSETAVSKWARARTMAAKVGKGLCKDDKAQKLALRHWLEAIDPRHRYGHNLHLYYDVWFHSQSSQPFFYWLDVGDGKEVNLEECPRNELHRQCIKYLGPKEREAYEVIVEGGRLIYRKSQNLVHTVEGSKWIFVLSSSRILYVGEKKKGQFQHSSFLAGGATIASGRLVARNGVLDAIWPYSGHYCPTKKNFMEFIGFLMEHNVDLTNVKKYATDDDIPPTKPVDEELQFESKKANNASSSDFGPAKNCTQDNMGHSGINMKTSQLKESKPLSRKWTTGAGPRIGCVREYPAKLQAKALEQLNLSPRVNLGKVAAKAPIPSPRPSPKIHLSPRLVHMGIPSS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3219 501 MobiDBLite consensus disorder prediction 376 391 - -
Ssu4g3219 501 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 4 499 IPR044159 -
Ssu4g3219 501 MobiDBLite consensus disorder prediction 376 405 - -
Ssu4g3219 501 PANTHER CALMODULIN-BINDING FAMILY PROTEIN 4 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3219 Ssu-Chr4 81495531 81499456 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3219 - - ccaj:109809343 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3219 4 81495531 81499456 Ssu8g0319 8 5328084 5330685 PCT