Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0269 ATGCGGTGGATAAATGCTTGCTTACGATATGAGCTAAGAAATTATCAAGCCCCACCAGGTAAAACAGTTGCAAAGGACTTAAGCAGAAGCTTAAGCCCTACGTCTGAGAAGAAAGCCAAGCAGCTTATACTTGAATATGCAAATGCTGATGGACCAGTGAGTATTGTGCACTTTGATATAGACCAATGGTCCTCCTCGCAGGCTTCTTCTCTCACTGACTTTGAAGAGTGTGATGATTTTTCTTCTGTTTATAATTCATCTGCTGCCAAAGCTAACACCACAAGCCAGACCAAGCTTTTTAGCAAGCTTTGGCAACTGATACAAGGTAAAGATAGTAGTCATCACCATAGTCATGTTTCATCACAAGAAAAATCTGGATATCAAGATAGCAATCCTCCGCGGCTGAGTATATCAACTGGAACCGAGGGTCTTGGGAGTGAGTTTGCAACTCCCATTGTCACATCTAGAACTTCCCTTGATTTCTCTAGATTGACGAGTATGAAGGAAGGAGATAGGAGAAATTCAGATAGTACTGTCATGGGAAGCTCAAATAAATTCAGTGTACGTAGAAAAGGTTCCTTCTCAGATTCCTTAAGCATGGAGAAATATGAGCTGGAGAAGTATGCAGAAGCTTTAAAAGATTCTAGTGTGAGTGCTAGACATCAAAGACGTAGAAGAGCAGCTTCTTGTAGTTAG 696 0.4124 MRWINACLRYELRNYQAPPGKTVAKDLSRSLSPTSEKKAKQLILEYANADGPVSIVHFDIDQWSSSQASSLTDFEECDDFSSVYNSSAAKANTTSQTKLFSKLWQLIQGKDSSHHHSHVSSQEKSGYQDSNPPRLSISTGTEGLGSEFATPIVTSRTSLDFSRLTSMKEGDRRNSDSTVMGSSNKFSVRRKGSFSDSLSMEKYELEKYAEALKDSSVSARHQRRRRAASCS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0269 231 MobiDBLite consensus disorder prediction 164 184 - -
Ssu8g0269 231 MobiDBLite consensus disorder prediction 123 143 - -
Ssu8g0269 231 MobiDBLite consensus disorder prediction 112 143 - -
Ssu8g0269 231 PANTHER FAMILY PROTEIN, PUTATIVE-RELATED 1 231 - -
Ssu8g0269 231 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 231 IPR040265 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0269 Ssu-Chr8 3996941 3997636 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0269 - - gmx:100819899 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0269 8 3996941 3997636 Ssu8g0269 8 3996941 3997636 ECH
Ssu8g0269 8 3996941 3997636 Ssu4g3295 4 83086661 83089596 PCT