Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3295 atgaTGGAAAGAATAGTTAGAAGGCTGTTAAATGTGATAGGGAGAGAGGAGAAGAGTAAGATGAAGCCTATTCTCCTGAAATGTGGTTTGGCTTTGGCCCTTACCCTTGCTGGATTTCTCTTCTCTCACAACAGAACCAGAAGAATCAAGCCCCCCGCTACTTCCCCCGGGGGGCTCCCTTCAGGCCATTGGACGGAAGTTAATTTAGGGAGAGACGAAAGGGTTGCATCAAGTTCTTGCAGCACTGTTTCAGAGGAAAGTGTGTTGGATGCTGAAGAAACATACATTAACAAGGTGATTGGTGAAAATTCCCCATTGGGTCTCTCTCCAAGAACTAAACAAAACGGAAAGAAAGATGAGTTCCTCCTACCTGAATTTAATGATCTTACCAAGGAAGCAGACTTTGGAGCCAACATTGCAGGTAGTTCTTTTAAGAAAGAGGTAGAAACACCAAGGTCAAAAGTAGGGTCTCCTACGGCATATACAAGTCTTGAGAAGGATGATTATGAGAAAGAAAACAGGAAACTCAGGAGCATGATCAGAATGCTTCAAGAGAGGGAAACAAGTCTCGAGGTTCAACTGCTTGAATACTGTGGCCTTAGAGAGCAAGAAGCAGCAGTGATGGAGCTCCAAAATAGATTAAAGATAAGTAATATGGAGGCAAAGATGTTCAATCTGAAAGTTGAGACCTTACAGTCTGAGAATCGGAGATTAGAGGCACAGGTGTCTGCTCATGCGAAAGTGCTGTCTGAGCTTGAGGCggcaaaaacaaaagtaaaatttttgaagaagaaaattaagtatgaaGCTGAACAGAATAGGGAGCATATCATGAATCTTAAACAAAAAGTTGCCAAGTTGCAAGATCACGAATACAAAGCTGCTGCTAATGATCAAGAGATTCAAATAAAGCTGAAAAGTCTAAAGGATCTAGAGTGTGAGGCAGAACAGTTGAGGAAATCTAATTTGAGACTGCAGATGGACAATTCTGACTTAGCTCGAAGATTGGATTCTACTCAGATCCTTGCAAATGCTGTTCTAGAAGACCCTGAGGCAAATGCTCTGAAGGAAGAAGGTGAGCGTCTTAGACAGGAGAATGAAGGGTTGATGAAAGAACTTGAGCAACTACATGCTGATAGATGTTCAGATCTTGAAGAGTTAGTTTATTTGCGGTGGATAAATGCTTGCTTAAGACATGAGCTACGAAGTTATCAACCCCCACCTGGTAAAACAGTTGCAAGGGATTTAAGTAAAAGCTTAAGTCCTAAATCTGAGAAGAAAGCCAAGCAGCTTATACTTGAATATGCAAATAATGAAGGGCAAGGGAGCATTTCTGATTTGGACTCTGACCAATGGTCCTCTTCCCAGGCTTCTTTTCTCACAGACTCTGGAGAGCGTGAACAATGTTCTACTCTTGATAATTCATCTGAGGGCAAAGCTAACAGCACATGCAAGTCAAAGATTTTTGGCAAGCTTATGAGGCTGATACGAGGCAAAGATAGCCAGCATCAACGTGGTCAAGTTACATCTCAAGAAAAATCAATATCTCGAGAAGACAGCAATTCTTCACATTTCAGCTTGAGTTTATCAACTGGAAATGATTCTGGAACTGAGGGTCTTGCAACTCCCTCTGCCACATCTAGAACTTCCTTTGATTATAACCGGACACCGAGTTTGAAGGATGGAAGTGGGAGAAATTCAGATAGCCATACCCCAGGAAGCTCCAAGAATTTCATTCCAGGGAGAAGAAGTTCAGCAGATTTCAAAAACCGCCTTGATTCTTTCTCTGAAATGGAGAAATCCAATTTGGTGAAATACGCTGAAGCTTTAAAAAATTCTGATGGAACTCCCAAACATAAAATACACAGAAGATCAGCATCAAATAGTTCATTTTAA 1896 0.4072 MMERIVRRLLNVIGREEKSKMKPILLKCGLALALTLAGFLFSHNRTRRIKPPATSPGGLPSGHWTEVNLGRDERVASSSCSTVSEESVLDAEETYINKVIGENSPLGLSPRTKQNGKKDEFLLPEFNDLTKEADFGANIAGSSFKKEVETPRSKVGSPTAYTSLEKDDYEKENRKLRSMIRMLQERETSLEVQLLEYCGLREQEAAVMELQNRLKISNMEAKMFNLKVETLQSENRRLEAQVSAHAKVLSELEAAKTKVKFLKKKIKYEAEQNREHIMNLKQKVAKLQDHEYKAAANDQEIQIKLKSLKDLECEAEQLRKSNLRLQMDNSDLARRLDSTQILANAVLEDPEANALKEEGERLRQENEGLMKELEQLHADRCSDLEELVYLRWINACLRHELRSYQPPPGKTVARDLSKSLSPKSEKKAKQLILEYANNEGQGSISDLDSDQWSSSQASFLTDSGEREQCSTLDNSSEGKANSTCKSKIFGKLMRLIRGKDSQHQRGQVTSQEKSISREDSNSSHFSLSLSTGNDSGTEGLATPSATSRTSFDYNRTPSLKDGSGRNSDSHTPGSSKNFIPGRRSSADFKNRLDSFSEMEKSNLVKYAEALKNSDGTPKHKIHRRSASNSSF 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3295 631 Coils Coil 352 379 - -
Ssu4g3295 631 MobiDBLite consensus disorder prediction 496 586 - -
Ssu4g3295 631 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 8 631 IPR040265 -
Ssu4g3295 631 Coils Coil 166 186 - -
Ssu4g3295 631 MobiDBLite consensus disorder prediction 502 581 - -
Ssu4g3295 631 MobiDBLite consensus disorder prediction 609 631 - -
Ssu4g3295 631 PANTHER FAMILY PROTEIN, PUTATIVE-RELATED 8 631 - -
Ssu4g3295 631 Coils Coil 301 328 - -
Ssu4g3295 631 MobiDBLite consensus disorder prediction 442 481 - -
Ssu4g3295 631 Coils Coil 200 290 - -
Ssu4g3295 631 MobiDBLite consensus disorder prediction 404 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3295 Ssu-Chr4 83086661 83089596 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3295 - - gmx:100781632 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3295 4 83086661 83089596 Ssu4g3295 4 83086661 83089596 ECH
Ssu8g0269 8 3996941 3997636 Ssu4g3295 4 83086661 83089596 PCT