Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0266 ATGGTTGCTGAAACCTCCGAGTCCCACGAAAACCTTGCCAAATCCAATTGTGGTATTACAGTATCCAACAACACCATGCTGGATTCCGCCACTCCCCATGACAAAATCACCACAGCAGTTTCTGGCTTCGTACTTGAGGATGTTCCTCATCTATCTGATTACATCCCTGATCTCCCCACATATCCTGACCCGTTACAAGACAATCCTTCCTATTCAGTTGTTGCGCAATATTACGTGAATGAGGATGATACAGTTGCACAACAGATAGTTGTACACAAAAGTAGTCCAAGAGGGACCCATTTTCGGCGTGCTGGGCCTGCTCAGAAGGTATATTTTGATTCAGAGGAAGTGTACGCTTGTATTGTCACGTGTGGTGGTCTTTGTCCTGGTCTAAATACAGTGATAAGAGAAATAGTTTGCGGCTTATATCATATGTATGGGGTGCACAAAGTTCTGGGAATAGAGGGAGGATATCCTGGTTTTTATTCTCGAAATACTGTTCCTTTAACACCCAAGGTTGTGAATGATATCCACAAACGTGGTGGAACCATCCTTGGGACATCATATGGAGGCCATGACACCTCAAAGATTGTTGATAGCATTCAGGACCGGGGCATTAATCAGGTTTATATACTTGGAGGATATGGAACTCAGAATGAAGCAGCTATGATTTTTGAGGAAGTTAGAAGGCGTGGCTTGAAAGTTGCAGTAGTCGGAATTCCAAAAACTATTGACAATGATATCCCAGTTATTGACAAGTCAATTGGTTTCGACACTGCTGTTGAAGAGGCACAACGAGCTATCAATTCTGCTCATGTGGAAGCAGAAAGCACTGAGAATGGTATTGGTGTTGTAAAATTAATGGGGCGTTACAGTGGACTTATAGCCATGTATGCAACTCTTGCTAGCCGTGATGTCGACTGTTGCTTGATTCCAGAGTCACCCTTTTACCTGGAGGGTCCAGGAGGGCTGCTGGAGTTCATTGAGAAAAGACTCAAAGAACAAGGGCACATGGTTATAGTAATAGCTGAAGGTGCAGGTCAGGAACTTCTTTCTGGCAACCCATCTATTGTTCATAAGCAGGATGCTTCTGCTGACAAATTACTTCCAGATGTTGGCCTGTGGTTATCTCAGAAAGTTAAGGATCACTTTGCAAAACATCAAAAATTGGCTATAAATCTGAAGTACATTGATCCTACTTACATGATCCGTGCTATCCCAAGTAATGCATCTGATAATGTATACTGTACCCTCCTTGCCCAAAGTGCTGTTCATGGTGCAATGGCAGGATACACAGGCTTCACCGTGGGCCCAGTTAATGGCAGAAATTGTTACATTCCATTTCATCTGATAAACGAGGGAGAGAAGAGGGTTGTGATAACTGATCGTATGTGGGCAAGGTTACTATCTTCAACGCATCAGCCTAGCTTCTTGAATCCAAAAGATATCACAGGAGAAGGGGAGGAGAGAACGGAACACCAAACCTCAGACGGGCAGAACCATCCAGAAATAGCAGACGAAACCGGGCATAATACAGAGCACAAATATAACACCAAATTAATATGCCTTTAA 1572 0.4345 MVAETSESHENLAKSNCGITVSNNTMLDSATPHDKITTAVSGFVLEDVPHLSDYIPDLPTYPDPLQDNPSYSVVAQYYVNEDDTVAQQIVVHKSSPRGTHFRRAGPAQKVYFDSEEVYACIVTCGGLCPGLNTVIREIVCGLYHMYGVHKVLGIEGGYPGFYSRNTVPLTPKVVNDIHKRGGTILGTSYGGHDTSKIVDSIQDRGINQVYILGGYGTQNEAAMIFEEVRRRGLKVAVVGIPKTIDNDIPVIDKSIGFDTAVEEAQRAINSAHVEAESTENGIGVVKLMGRYSGLIAMYATLASRDVDCCLIPESPFYLEGPGGLLEFIEKRLKEQGHMVIVIAEGAGQELLSGNPSIVHKQDASADKLLPDVGLWLSQKVKDHFAKHQKLAINLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAMAGYTGFTVGPVNGRNCYIPFHLINEGEKRVVITDRMWARLLSSTHQPSFLNPKDITGEGEERTEHQTSDGQNHPEIADETGHNTEHKYNTKLICL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0266 523 PIRSF ATP_PFK_TP0108 29 482 IPR012004 GO:0003872|GO:0005524|GO:0006096
Ssu8g0266 523 PANTHER - 17 500 - -
Ssu8g0266 523 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 17 500 - -
Ssu8g0266 523 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 48 478 IPR012004 GO:0003872|GO:0005524|GO:0006096
Ssu8g0266 523 MobiDBLite consensus disorder prediction 476 511 - -
Ssu8g0266 523 Pfam Phosphofructokinase 120 425 IPR000023 GO:0003872|GO:0006096
Ssu8g0266 523 Gene3D - 113 303 - -
Ssu8g0266 523 MobiDBLite consensus disorder prediction 483 511 - -
Ssu8g0266 523 PRINTS ATP-dependent phosphofructokinase family signature 121 140 IPR022953 GO:0003872|GO:0006002|GO:0006096
Ssu8g0266 523 PRINTS ATP-dependent phosphofructokinase family signature 256 274 IPR022953 GO:0003872|GO:0006002|GO:0006096
Ssu8g0266 523 PRINTS ATP-dependent phosphofructokinase family signature 334 346 IPR022953 GO:0003872|GO:0006002|GO:0006096
Ssu8g0266 523 PRINTS ATP-dependent phosphofructokinase family signature 205 221 IPR022953 GO:0003872|GO:0006002|GO:0006096
Ssu8g0266 523 PRINTS ATP-dependent phosphofructokinase family signature 238 255 IPR022953 GO:0003872|GO:0006002|GO:0006096
Ssu8g0266 523 PRINTS ATP-dependent phosphofructokinase family signature 277 293 IPR022953 GO:0003872|GO:0006002|GO:0006096
Ssu8g0266 523 SUPERFAMILY Phosphofructokinase 52 481 IPR035966 GO:0003872|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0266 Ssu-Chr8 3963762 3968414 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0266 K00850 - gmx:100815278 928.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0266 8 3963762 3968414 Ssu4g3297 4 83107917 83112741 PCT