Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0265 ATGTACAGAGCAGTAGCTTCACGTCTCACCCTTCCCAAGGGCAATGGGAGAACCTTGGGAGCCTCTAGATTTGCTTCTGGACGTTTATTCAGCTGGCTTACTGGGGAATCTTCCAGTTCTCTTCCTAATCTTGACACCCCACTTGGAGGAGTTTCCTTGCCACCTTCACTGCCAGATTATGTTGAACCAAGCAAGACCAAGATCACAACTCTCTCCAATGGTCTGAAAATAGCATCAGAAACCTCACCAAACCCTGCTGCCTCAATTGGGTTATATCTTGACTGTGGTTCCCTCTATGAGACCCCATTGTCAAGCGGGGCATCGCACCTGCTAGAGAAAATGGCTTTCAAGAGCACGACAAACCGAAGTCACTTTCGTGTTGTAAGGGAAGTAGAAGCAATTGGTGGCAATGTAGGAGCCTCGGCCTCTCGGGAGCAAATGGGCTACACATTTGATGCTCTGAAAACCTATGTTCCACAAATGATTGAGTTGCTGGTTGACTGTGTAAGGAACCCGGCCTTCTTGGATTGGGAGGTCAATGAAGagCTTCGAAAGGTGAAAGCAGAGCTTGGAGAACTATCAAACAATCCCCAGGGCTTACTTTTGGAGGCAGTTCATTCTGCTGGTTATTCTGGAGCATTGGCTAATCCACTTTTGGCTTCTGAATTAGCACTGAACAGATTAAATAGCTCCATTTTAGAGGAATTTGTTGCTGAGAATTATACTGCACCTAGAATGGTACTTGCAGCATCTGGGGTTGAGCATGAAGAACTTTTATCCGTTGCTGAACCACTTCTCTCTGATCTACCAAGTGTTCCCTGTCCTGAAGAACCAAAATCTACATATGTTGGGGGTGATTTTCGTCGTCAAGGTGAATCAGGGGGTGCACATGTAACTATTGCTTTTGAAGTGCCTGGTGGctggaaaaaagagagagaagctaTTGTTTTGACTGTTCTACAGATGCTTATGGGAGGAGGTGGGTCATTCTCAGCCGGAGGGCCAGGAAAAGGGATGCACTCAAGGCTGTATCTTCGTGTCTTGAATGAATATCAACAGATTCAATCATTTTCTGCATTCAACAGTATCTTCAACAATACAGGGTTATTTGGCATATATGCAAGCACAAGCTCTGATTTTGTGGCAAAAGCTGTGGATGTAGCAGCCAAAGAATTAATAGCAATTGCATCACCGGGACAAGTTTCACAGGTACAGCTTGACCGTGCCAAGGAATCCACTAAGTCCGCAGTCCTAATGAATTTAGAGTCCAGAATGATTGCATCAGAGGATATGGGAAGGCAGATATTGACTTATGGAGAAAGGAAACCACTGGAGCAGTTCTTAAAGGCAGTAGATGGAATCACATTGAATGATATCACTAAAATTGCTCAGGAGACTATTTCCTCACCTCTCACTATGGCATCCTATGGGGAtgTTATCAATGTCCCCAGTTACGAATCCGTTAGTTGCAAGTTCCATGCAAAATGA 1488 0.4415 MYRAVASRLTLPKGNGRTLGASRFASGRLFSWLTGESSSSLPNLDTPLGGVSLPPSLPDYVEPSKTKITTLSNGLKIASETSPNPAASIGLYLDCGSLYETPLSSGASHLLEKMAFKSTTNRSHFRVVREVEAIGGNVGASASREQMGYTFDALKTYVPQMIELLVDCVRNPAFLDWEVNEELRKVKAELGELSNNPQGLLLEAVHSAGYSGALANPLLASELALNRLNSSILEEFVAENYTAPRMVLAASGVEHEELLSVAEPLLSDLPSVPCPEEPKSTYVGGDFRRQGESGGAHVTIAFEVPGGWKKEREAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYASTSSDFVAKAVDVAAKELIAIASPGQVSQVQLDRAKESTKSAVLMNLESRMIASEDMGRQILTYGERKPLEQFLKAVDGITLNDITKIAQETISSPLTMASYGDVINVPSYESVSCKFHAK 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0265 495 PANTHER MITOCHONDRIAL-PROCESSING PEPTIDASE SUBUNIT ALPHA-LIKE 24 494 IPR037715 GO:0006627
Ssu8g0265 495 PANTHER METALLOPROTEASE 24 494 - -
Ssu8g0265 495 ProSitePatterns Insulinase family, zinc-binding region signature. 96 119 IPR001431 GO:0004222|GO:0006508
Ssu8g0265 495 SUPERFAMILY LuxS/MPP-like metallohydrolase 65 275 IPR011249 GO:0046872
Ssu8g0265 495 SUPERFAMILY LuxS/MPP-like metallohydrolase 292 485 IPR011249 GO:0046872
Ssu8g0265 495 Gene3D - 58 268 - -
Ssu8g0265 495 Pfam Insulinase (Peptidase family M16) 77 220 IPR011765 -
Ssu8g0265 495 Pfam Peptidase M16 inactive domain 232 411 IPR007863 -
Ssu8g0265 495 Gene3D - 280 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0265 Ssu-Chr8 3957104 3961272 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0265 K01412 - gmx:100810996 857.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0265 8 3957104 3961272 Ssu8g0265 8 3957104 3961272 ECH
Ssu8g0265 8 3957104 3961272 Ssu4g3298 4 83117533 83123590 PCT