Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3298 ATGTACAGAGCAACAGCTTCATCATTCAGAAGGCATCTCAagGGCCATGGAAGCAAGTTGGGATCCACTAGGTTTGCCACTTCAGCCGCGGTAGCTGCGAGGACTTCCTCAGGTGGTTTGTTTAGCTGGCTTACTGGGGAGCATTCTAGTTCTCTTCCTCCTCTGGACATACCACTTGCTGGTGTTGCTCGCCCAGATCCACTTCCAGATTATGTTGAGCTAAGCAAGACCAAGATCACAACACTCCCCAATGGACTCAAAATAGCATCAGAGACCTCGCCTAACCCTGCAGCCTCAATTGGGTTATACCTTGACTGTGGTTCCATTTATGAGACGCCATTGTCAAGCGGTGCTTCACACTTGCTAGAGCGAATGGCTTTCAAAAGCACAACAAACCGTAGTCACTTTCGTATTGTAAGGGAAGTAGAAGCAATTGGTGGTAATATAGGAGCCTCAGCCTCTCGGGAGCAAATGGGTTATACATTTGATGCCTTAAAGACCTATGTTCCACAAATGGTTGAATTACTGGTTGACTGTGTAAGGAACCCAGCCTTCTTGGATTGGGAGGTCAATGAAGagCTTCGGAAGGTGAAAGCAGAGCTTGGAGAACTCTCTAACAATCCCCAGGGCTTGCTTTTGGAAGCAATTCACTCTGCTGGTTATTCTGGTGCATTGGCTTATCCTCTTTTGGCTCCTGAAACAGCACTGAACAGATTGGACGGCCCCAGTTTAGAGGAATTTGTTGCTGAGAATTACACAGCACCTAGAATGGTACTTGCAGCATCTGGGGTTGAGCACGAAGAGCTTCTATCTGTTGCTGAGCCACTTCTCTCTGATCTACCAAATGTTCCCCGTCCTGAAGAACCAAAATCTATCTATGTTGGGGGTGATTTTCGTCGTCATGGTGAATCAGGGGGTACACATGTTGCTATTGCATTTGAAGTGCCTGGTGGCTggcaaaaagagaaagatgCTATAGTTTTGACTGTTTTACAGATGCTTATGGGAGGAGGTGGGTCATTCTCAGCAGGAGGCCCCGGAAAAGGGATGCACTCAAGGCTATATCTTCGTGTGCTGAATGAATATCAACAGATTCAATCTTTTTCTGCATTCAACAGTATCTTCAATAATACAGGACTGTTTGGCATTTATGCAAGCACTAGCCCTGATTTTGTGCTAAAAGCTGTGGATATAGCAGTGAAAGAACTAATAGCAATTGCATCCCCTGGACAAGTTTCACAGGTACAGCTTGACCGAGCCAAAAAATCCACAAAGTCTGCAGTTCTAATGAATCTGGAATCTAGAATGATTGCATCAGAAGATATAGGAAGGCAGATTTTGACTTATGGAGAAAGGAAGCCTGTGGAACAGTTCCTGAAGGCTGTAGATGAAATCACGTTGAATGATATCACTAAAATTGCTCAGAAGATTATTTCCTCACCTTTGACCATGGCATCATATGGGGATGTCATGAATGTGCCAAGTTATGAATCTGTTAGCAGCAAGTTCCATTCAAAATGA 1521 0.4425 MYRATASSFRRHLKGHGSKLGSTRFATSAAVAARTSSGGLFSWLTGEHSSSLPPLDIPLAGVARPDPLPDYVELSKTKITTLPNGLKIASETSPNPAASIGLYLDCGSIYETPLSSGASHLLERMAFKSTTNRSHFRIVREVEAIGGNIGASASREQMGYTFDALKTYVPQMVELLVDCVRNPAFLDWEVNEELRKVKAELGELSNNPQGLLLEAIHSAGYSGALAYPLLAPETALNRLDGPSLEEFVAENYTAPRMVLAASGVEHEELLSVAEPLLSDLPNVPRPEEPKSIYVGGDFRRHGESGGTHVAIAFEVPGGWQKEKDAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYASTSPDFVLKAVDIAVKELIAIASPGQVSQVQLDRAKKSTKSAVLMNLESRMIASEDIGRQILTYGERKPVEQFLKAVDEITLNDITKIAQKIISSPLTMASYGDVMNVPSYESVSSKFHSK 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3298 506 Pfam Insulinase (Peptidase family M16) 88 232 IPR011765 -
Ssu4g3298 506 Pfam Peptidase M16 inactive domain 243 422 IPR007863 -
Ssu4g3298 506 SUPERFAMILY LuxS/MPP-like metallohydrolase 76 286 IPR011249 GO:0046872
Ssu4g3298 506 SUPERFAMILY LuxS/MPP-like metallohydrolase 305 497 IPR011249 GO:0046872
Ssu4g3298 506 PANTHER MITOCHONDRIAL-PROCESSING PEPTIDASE SUBUNIT ALPHA-LIKE 18 506 IPR037715 GO:0006627
Ssu4g3298 506 ProSitePatterns Insulinase family, zinc-binding region signature. 107 130 IPR001431 GO:0004222|GO:0006508
Ssu4g3298 506 Gene3D - 291 503 - -
Ssu4g3298 506 Gene3D - 70 279 - -
Ssu4g3298 506 PANTHER METALLOPROTEASE 18 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3298 Ssu-Chr4 83117533 83123590 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3298 K01412 - gmx:100810990 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3298 4 83117533 83123590 Ssu4g3298 4 83117533 83123590 ECH
Ssu8g0265 8 3957104 3961272 Ssu4g3298 4 83117533 83123590 PCT