Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0193 ATGCCATCTTCATCAATTTTCATAAACTGCAATCACATTACACACACACAGTGTTTAAAGAGAGAAACCATGCGAATCTCAAAAGCTTCCTTCTACGCTGTTCTCCTGCGCAAACCTCATCACCATCAAAACCACGTCGTTTTATCGCGCCGTTTTGTTGTCACCTGCGCGCTGGGTCTGCTGCTCTTGGCGAGCACCCTCTACATTTTCTGGCCGTCCGATCCTGACCTCAAGATCGTGGGGCTGAAGCTGAGGCGAATCAAGGTGCACCCTGTGCCGCCGATCACCGTAGACATCTCCATGATCCTCACGCTGAGGGTGCACAACGCTGACGTGTACTCCATGGACTTCGGGGCAATTAACGTGGCAGTCGCCTACAGGGGGAAGATGCTGGGCCACGTGTCGTCCAGGCACGTGCACGTGAGGGCCAGGGGATCTTCCTACGTGGATGCTGACGTGGACTTTGCGGGCATCAGTGTGCTCCCTGAGCTGGTCTTGCTGCTGGAGGACCTGGCCAAAGGTATCGTACCCTTTGATACAGTTAGCCAGACTAGGGGCCAATTGGGCCTTTTCTTCTTTCACTTCCCTATGAAGGTAACTAACTTAATCCTACTATCACCTTCATTAATCATATGCTTCttttacttctttatttttagaaaaaaatcactgattgataataacaaaactCAAGCAGGAAATCATAAGAGATGA 714 0.479 MPSSSIFINCNHITHTQCLKRETMRISKASFYAVLLRKPHHHQNHVVLSRRFVVTCALGLLLLASTLYIFWPSDPDLKIVGLKLRRIKVHPVPPITVDISMILTLRVHNADVYSMDFGAINVAVAYRGKMLGHVSSRHVHVRARGSSYVDADVDFAGISVLPELVLLLEDLAKGIVPFDTVSQTRGQLGLFFFHFPMKVTNLILLSPSLIICFFYFFIFRKKSLIDNNKTQAGNHKR 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0193 237 SUPERFAMILY LEA14-like 61 170 - -
Ssu8g0193 237 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 31 200 - -
Ssu8g0193 237 PANTHER EXPRESSED PROTEIN 31 200 - -
Ssu8g0193 237 Pfam Late embryogenesis abundant protein 104 200 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0193 Ssu-Chr8 2888035 2888748 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0193 - - gmx:100792375 273.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0193 8 2888035 2888748 Ssu4g3372 4 84134799 84138880 PCT