Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0177 ATGGAGGAAAGCATCAATAGAGGGGAATTTCAGCCTAATTTGGCTAAACAGTCTTCATTGAGGTTAGGTGGAAGTTTTAAATCAACATTGTCTGGAAGATCAACTCCACGAAATTCCCCTTCATTTCGCCGGCTGAATTCTGGCCGAACACCAAGAAAAGATGGAAGGAGCAGCATTGGTGGTGCACTGTGGTTTCGGAGCAATCGTTTACTCTTGTGGTTGCTTCTAATTACCCTCTGGGCTTATCTTGGATTTTTTGTTCAGTCCAGGTGGGCTCATAGTGATAAGAAGGAGGAATTTTCTGGCTTTGGAACCGGGCCAAGAAATACCAACTCGGTTGCTGAACAGAGTCAGCGCCGTGATTTGATTGCTAGTGATAACTCCTTATCTGCTAATAATGAGACTGTTGCAAATATATCAGGGATTAGTAAAACTATAAATGTAGCTTTGGCCAAGAAAGACAATGATGTTCCATCTCATCGTAAAACAAGCTCAAAGAAGAGGAGCAGGAGCAGACGTGCTTTGAAAGGTAAATCTCGTGGTAGGCTGAAACCAACTACAGAAGTTAAGAGCAGTGATATAGAGGAGCAGGAGCCAGATATTCCTACAACCAATAGTACATATGGATTGCTTGTTGGTCCGTTTGGCTCAGTGGAGGATAAGATTCTGGAATGGAGTCCCGAGAAACGTTCTGGGACATGTAACAGGAAGGGGGACTTTGCACGTCTGGTTTGGTCCAGAAGATTTATCTTGATATTCCATGAGCTTTCCATGACTGGAGCTCCACTTTCAATGATGGAGTTGGCTACTGAACTTTTGAGCTGTGGGGCTACTGTTTCAGCTGTTGTGCTTAGCAAGAAGGGTGGTTTGATGTCAGAGCTTGCTAGGAGACGAATCAAGGTGCTTGAGGACAAAGCAGATCTCAGCTTCAAAACTGCAATGAAGGCTGATCTTGTCATTGCTGGTTCGGCTGTCTGTGCATCCTGGATTGAACAATATATTGAACATTTTCCTGCCGGTGGAAGCCAAGTTGCTTGGTGGATTATGGAAAATCGACGAGAGTACTTTGATCGCTCAAAGGATGTCTTGCACAGAGTAAAGATGTTGGTTTTCCTTTCTGAATCACAATCTAAACAATGGCAAAAATGGTGTGAGGGGGAAAGCATAAAACTGAGATCCCACCCTGAAATTGTTCCATTGTCTGTTAATGATGAACTGGCATTTGTAGCTGGTATTCCTTCAACACTTAACACTCCATCCTTCAGTACAGAGAAAATGGTTGAGAAAAGGCAGTTATTGCGAGAATCAGTCCGAAAAGAAATGGGCCTAACTGATAATGATATGCTTGTGATGTCTCTAAGTAGCATCAACACTGGGAAGGGCCAGCTATTGCTTCTGGAATCAGCAAGCTCAGTACTTGAACAAGTACAGTTGCAAGatgatttgaaaatgaaaaaagtatcAAATATAAAGGAAGGCCTATCTACCCTGACTAAAAGACATCGTATTAGAAAGTTGTTGCCGTTGTTGAAGAGAGGCAAAGTAGCTTCAAATAATATCTCAAGCAATTCTTTAAGCAGAAGGAAACAAGTGTTGCCTAATGACAAAGGAACAATGCAACAATCTCTCAAACTTCTCATTGGTTCTGTTGGATCAAAGAGTAACAAGGTGGATTATGTTAAAAGCCTTCTAAGTTTCTTAGAACAGCATCCAAACACCTCGAAATCAGTTTTGTGGACTCCATCCACAACTCGGGTTGCCTCACTTTACTCTGCTGCAGATGTTTATGTTATAAACTCTCAGGGACTGGGAGAAACATTTGGACGGGTGACTATAGAAGCGATGGCATTTGGTCTTTCGGTTCTTGGAACGGATGCTGGGGGAACACAGGAGATTGTTGAGCACAATGTTACAGGTCTTCTTCATCCTATTGGACATCCGGGGAATCATGTTCTTGCAATGAATCTCCGGTTTTTACTCAAAAACCAGTTGGCAAGGAAGCAAATGGGAGTGGAAGGAAGAAAGAAGGTGCAGAGGATGTATTTGAAGCAACacatgtataacaaatttttagagGTTATTGTTAGGTGCATGAGAAGCAAATAA 2106 0.4179 MEESINRGEFQPNLAKQSSLRLGGSFKSTLSGRSTPRNSPSFRRLNSGRTPRKDGRSSIGGALWFRSNRLLLWLLLITLWAYLGFFVQSRWAHSDKKEEFSGFGTGPRNTNSVAEQSQRRDLIASDNSLSANNETVANISGISKTINVALAKKDNDVPSHRKTSSKKRSRSRRALKGKSRGRLKPTTEVKSSDIEEQEPDIPTTNSTYGLLVGPFGSVEDKILEWSPEKRSGTCNRKGDFARLVWSRRFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSKKGGLMSELARRRIKVLEDKADLSFKTAMKADLVIAGSAVCASWIEQYIEHFPAGGSQVAWWIMENRREYFDRSKDVLHRVKMLVFLSESQSKQWQKWCEGESIKLRSHPEIVPLSVNDELAFVAGIPSTLNTPSFSTEKMVEKRQLLRESVRKEMGLTDNDMLVMSLSSINTGKGQLLLLESASSVLEQVQLQDDLKMKKVSNIKEGLSTLTKRHRIRKLLPLLKRGKVASNNISSNSLSRRKQVLPNDKGTMQQSLKLLIGSVGSKSNKVDYVKSLLSFLEQHPNTSKSVLWTPSTTRVASLYSAADVYVINSQGLGETFGRVTIEAMAFGLSVLGTDAGGTQEIVEHNVTGLLHPIGHPGNHVLAMNLRFLLKNQLARKQMGVEGRKKVQRMYLKQHMYNKFLEVIVRCMRSK 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0177 701 MobiDBLite consensus disorder prediction 181 197 - -
Ssu8g0177 701 Pfam Glycosyl transferases group 1 551 675 IPR001296 GO:0016757
Ssu8g0177 701 Pfam Glycosyl-transferase family 4 245 414 IPR041693 -
Ssu8g0177 701 CDD GT4_PimA-like 250 694 - -
Ssu8g0177 701 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 254 696 - -
Ssu8g0177 701 PANTHER BNAA05G14870D PROTEIN 1 701 - -
Ssu8g0177 701 MobiDBLite consensus disorder prediction 27 56 - -
Ssu8g0177 701 MobiDBLite consensus disorder prediction 104 119 - -
Ssu8g0177 701 MobiDBLite consensus disorder prediction 27 46 - -
Ssu8g0177 701 MobiDBLite consensus disorder prediction 98 119 - -
Ssu8g0177 701 Gene3D Glycogen Phosphorylase B; 421 681 - -
Ssu8g0177 701 MobiDBLite consensus disorder prediction 163 180 - -
Ssu8g0177 701 MobiDBLite consensus disorder prediction 153 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0177 Ssu-Chr8 2691913 2695658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0177 18 699 Glycosyltransferase AT3G15940 62.084 0.0 829
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0177 - - gmx:100793827 1202.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0177 8 2691913 2695658 Ssu4g3384 4 84241154 84244440 PCT