Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0161 atgtgcACTACTATTGTTTTATTTGAACTTTTGACTTTCCAATCGCCGCCTGTTTTTGACATCAAAGATATAAATAGAGTCATAGTTGGACTTGATATTCCAACAATTGAAGTTCGATACGAGCACCTGAATATTGAGGCTGAGGCTTTTGCGGGAGGTAGAGCTTTGCCCTCTTTCATCAACTCTGTTACTAATGTCATAGAGGGATTTCTGAATTTGCTCCATATTCTCCCAAGCAAAAAGAAACACGTGACTATTCTTAAAGATGTTAGCGGGATTGTTAAACCTCGCAGGATGACACTGCTTTTGGGTCCTCCAAGTTCAGGAAAGACCACACTCCTTTTGGCCTTGTCAGGAAAACTTGATGAAAGTCTTCAGGCATCTGGGAGAGTGACTTACAATGGGCATGAAATGAACGAGTTTGTACCCCAGAGAACTGCTGCGTACATCAGCCAGCATGATGTTCATATTGGAGAAATGACTGTGAGGGAAACCTTGGCTTTCTCAGCAAGGTGCCAAGGGGTTGGATCACGTTATGACATGCTATCTGAATTGTCTAGAAGAGAGAAAGCAGCAAATATCAAGCCTGACCCAGATCTTGATGTCTACATGAAGGCAACTGCAACCGAAGGCCAGGAGTCAAGCATAGTAACAGATTATACACTGAAGCTTTTGGGGCTGGACATATGTTCTGATACTATGGTGGGGGATGAAATGCTCTTCAAGCAGTACCTCTTGCTATTATTTGTCAGCCAGATGGCTTCTGCATTATTCCGAGCTATTGGAGCACTTGGTAGAAACATGATTGTCGCCAACACATTTGGAGCCTTTGCTGTTCTCACCCTTCTTGCATTGGGTGGCTTCATTCTGTCAAGAAAGGATATCAAAGGATGGTGGATTTGGGGTTACTGGATTTCACCTTTAACGTACGGGACAAATGCTTTGATGGCCAATGAATTTCTGGGAAACAGTTGGCACAACGGTACCAACAATTTAGGAGCTGAATTTCTGGAGAGCCGTGGGTTCTTCTCAGATTCATATTGGTATTGGTTAGGCTTTGGGGCAGTGGCTGGATTTGTGTTCCTTTTCAACATGTTGTTTGGTTTTGCTCTCGAATTCCTTGGCCCATTTGATAAGCCACAAGCAACAATAACTGAAGAAGAACCAGAAGCAAATACACCTAGTGAAGGAACCGTAGCAGAAGTTGAATTACCACGCATCGAAAGTTCAGGAAGAGCTGATTCTGTTGTGGAGTCCAGccatgaaagaaaaaaggaatggTTCTTCCTTTTGAACCACATTCTATCACCTTTGATGAAGTCATATACTCTGTTGACATGCCGCAGGAGAAACAAGCAGCTTATACAAGAACTGGGTCAGCCTGCTCCTGGTTCAAAGGATCTTCATTTCCCTACTCAATACTCTCAGTCATTCTTGGTCCAATGCCAAGCTTGCTTATGGAAACAACGTTGGTCATATTGGCGTAATCCACCGTACACTGCTGTGAGGTTTTTCTTCACTACCTTCATAGCCCTGATGTTTGGAACAATGTTCTGGGACCTCGGAGGCAAACATTCAAATAGACAAAACCTGTTGAATGCAATAGGTTCAATGTATACTGCTGTTCTCTTCCTTGGAGTACAAAATTCTTCCACCGTACAGCCTGTGGTAGCAGTTGAAAGAACTGTCTTTTACAGAGAAAAAGCTGCTGGAATGTATTCTGCCTTACCCTATGCATTTGCACAGATTCTGGTAGAGCTACCGTACGTCTTTGCTCAAGCGGTGACATATGGTCTAATAGTTTATGCCATGATTGGATTTGACTGGACAGCAGAGAAATTCTTTTGGTATCTATTTTTCATGTACTTCACATTTTTGTACTTCACCTTCTACGGCATGATGTCTGTGGCAGTGACACCAAACCACCATGTTGCTTCCATTGTGGCTGCTGCATTTTATGCAATTTGGAATCTCTTCTCAGGATTTATTGTCGCAAGACCTAGCATCCCTGTGTGGTGGAGATGGTACTATTGGGCATGTCCAGTGGCCTGGACCATATATGGATTGGTTGCATCTCAGTTTGGAGATATAACGGAACCAATGGTGTCTGAAGGTGGCAAGATTGTGAAAGATTTCATCGAAGATTCTTATGGTATCAAACATGACTTCATTGGAGTATGTGCTGTTGTGGTTGCCGGCTTTGCGGTTGtctttgcatttatttttgctGTTGCAATCAAGACCTTTAACTTCCAAAAGAGATAG 2265 0.4221 MCTTIVLFELLTFQSPPVFDIKDINRVIVGLDIPTIEVRYEHLNIEAEAFAGGRALPSFINSVTNVIEGFLNLLHILPSKKKHVTILKDVSGIVKPRRMTLLLGPPSSGKTTLLLALSGKLDESLQASGRVTYNGHEMNEFVPQRTAAYISQHDVHIGEMTVRETLAFSARCQGVGSRYDMLSELSRREKAANIKPDPDLDVYMKATATEGQESSIVTDYTLKLLGLDICSDTMVGDEMLFKQYLLLLFVSQMASALFRAIGALGRNMIVANTFGAFAVLTLLALGGFILSRKDIKGWWIWGYWISPLTYGTNALMANEFLGNSWHNGTNNLGAEFLESRGFFSDSYWYWLGFGAVAGFVFLFNMLFGFALEFLGPFDKPQATITEEEPEANTPSEGTVAEVELPRIESSGRADSVVESSHERKKEWFFLLNHILSPLMKSYTLLTCRRRNKQLIQELGQPAPGSKDLHFPTQYSQSFLVQCQACLWKQRWSYWRNPPYTAVRFFFTTFIALMFGTMFWDLGGKHSNRQNLLNAIGSMYTAVLFLGVQNSSTVQPVVAVERTVFYREKAAGMYSALPYAFAQILVELPYVFAQAVTYGLIVYAMIGFDWTAEKFFWYLFFMYFTFLYFTFYGMMSVAVTPNHHVASIVAAAFYAIWNLFSGFIVARPSIPVWWRWYYWACPVAWTIYGLVASQFGDITEPMVSEGGKIVKDFIEDSYGIKHDFIGVCAVVVAGFAVVFAFIFAVAIKTFNFQKR 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0161 754 Gene3D - 70 231 IPR027417 -
Ssu8g0161 754 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 25 240 - -
Ssu8g0161 754 PANTHER ATP-BINDING CASSETTE TRANSPORTER 25 240 - -
Ssu8g0161 754 PANTHER ATP-BINDING CASSETTE TRANSPORTER 240 426 - -
Ssu8g0161 754 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 446 754 - -
Ssu8g0161 754 Pfam Plant PDR ABC transporter associated 326 384 IPR013581 -
Ssu8g0161 754 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 171 IPR027417 -
Ssu8g0161 754 Pfam ABC transporter 87 186 IPR003439 GO:0005524
Ssu8g0161 754 Pfam ABC-2 type transporter 481 694 IPR013525 GO:0016020|GO:0140359
Ssu8g0161 754 Pfam ABC-2 type transporter 234 320 IPR013525 GO:0016020|GO:0140359
Ssu8g0161 754 PANTHER ATP-BINDING CASSETTE TRANSPORTER 446 754 - -
Ssu8g0161 754 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 240 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0161 Ssu-Chr8 2422811 2429362 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0161 K08711 - gmx:100793825 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0161 8 2422811 2429362 Ssu4g3395 4 84534280 84542072 PCT