Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0153 ATGGACGTTGTTCTTCAAACCAGAGGCCTTCTCTCTCTCCCCACGAACAGGCTCTCACTCTCACACCACTCTCACACTTTAAGGCACAGACTTTTCTCCCCAAAGCCAAAAATCCTTGGCggctcttctctttcttccaaTGGCTTCCAAAAACTCTCAAAACCCAATGTCTTTGGCCAGAGGGACAAAAATCTGTTCCTGTGTAGGGCTGAGGCTGCTGCAGCATTATTTGGGGAACAAGAAAGTGAGAAACCGAAGTTTTTGGGTGTTGAGGTTGCCACATTAAAGAAGATTGTGCCTCTGGGGATGATGTTCTTTTGCATCCTCTTCAACTACACCATTCTGAGAGACACCAAGGACGTGTTGGTCGTGACGGCGAGAGGAAGCAGTGCGGAGATTATACCGTTTCTGAAAACTTGGGTGAACCTTCCGATGGCCATTGGGTTCATGTTGTTGTACACAAAATTGGCTAATGTGTTGTCCAAGCAAGCTCTCTTTTACTCTGTCATTCTTCCCTTCATTGCTTTCTTTGGGGCGTTTGGTTTTTTTCTGTACCCTCTCAGCAACTATGTCCACCCTCAGGCCCTTGCGGATAACCTTCTTAACATCCTTGGCCCGAGGTTCCTTGGTCCTCTTGCAATCATGAGAATTTGGAGCTTCTGTTTGTTCTATGTCATGGCTGAGTTGTGGGGGAGTGTGGTCGTTTCCGTGCTGTTTTGGGGGTTTGCCAATCAGataacTACCGTTGAGGAAGCAAAAAGATTCTATCCTCTATTTGGACTTGGGGCCAATGTAGCCCTTGTGTTCTCTGGTCGGACAGTGAAATACTTTTCTAATCTGAGGAAGAATTTGGGTCCTGGAGTTGATGGCTGGGCCATCTCTCTAAAAGCAATGATGAGCATAGTTGTGGGCATGGGACTTGCAATCTGTTTCCTGTATTGGTGGGTGAATAACTATGTTCCTCTTCCTACACGtagcaagaagaagaagGAGAAGCCGAAAATGGGAACAATGGAGAGCATAAAGTTCTTGGtatcttcaaaatatataagGGATCTTGCCACTTTAGTGGTTGCATATGGAATTAGCATTAATCTTGTTGAGGTTACATGGAAATCAAAGCTCAAAGCTCAGTTCCCTAGCCCGAATGAGTACTCATCTTTTATGGGAGACTTCTCAACTGCAACTGGAATTGCTACATTCACAATGATGCTTCTAAGCCAATTTATATTTGACAAATATGGATGGGGAGTTGCTGCCAAGATCACCCCCACTGTCCTGCTTTTGACAGGAGTtggtttcttttctcttatattatttGGCGGCCCAGTTGCTCCTGTTATTGCAAAGTTTGGAATGACTCCACTGCTTGCTGCTGTATATGTGGGTGCCATGCAGAACATATTCAGCAAGAGTGCTAAGTACAGTTTATTCGATCCATGCAAAGAAATGGCCTACATACCCTTGGATGAGGATACCAAGGTCAAGGGGAAGGCAGCCATTGATGTTGTGTGCAACCCATTGGGGAAGTCCGGAGGTGCTCTAATTCAGCAGTTCATGATCTTAACTTTTGGTTCACTAGCCAATTCAACTCCATACCTGGGAGGGGTCCTTCTGGTGATTGTTCTTGCCTGGTTATCAGCAGCCAAGTCGCTTGATACCCAGTTTACTGCCTTGCGTCGAGAAGAAGAGCTTGAGAAAGAGATGGAAAGAGCAGCTGCAGTTAAGATACCAGTGGTGGCCAAGAGCGAGGATGGAAATAGTTCTCTTGCAAGTGTTCCACTGTTAAATCCAACAGCAGGTGACTCCTCAAGTAGTCCCTCTGAAGCCTCAACTCCTCGCAATATTTAA 1851 0.4419 MDVVLQTRGLLSLPTNRLSLSHHSHTLRHRLFSPKPKILGGSSLSSNGFQKLSKPNVFGQRDKNLFLCRAEAAAALFGEQESEKPKFLGVEVATLKKIVPLGMMFFCILFNYTILRDTKDVLVVTARGSSAEIIPFLKTWVNLPMAIGFMLLYTKLANVLSKQALFYSVILPFIAFFGAFGFFLYPLSNYVHPQALADNLLNILGPRFLGPLAIMRIWSFCLFYVMAELWGSVVVSVLFWGFANQITTVEEAKRFYPLFGLGANVALVFSGRTVKYFSNLRKNLGPGVDGWAISLKAMMSIVVGMGLAICFLYWWVNNYVPLPTRSKKKKEKPKMGTMESIKFLVSSKYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSSFMGDFSTATGIATFTMMLLSQFIFDKYGWGVAAKITPTVLLLTGVGFFSLILFGGPVAPVIAKFGMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGVLLVIVLAWLSAAKSLDTQFTALRREEELEKEMERAAAVKIPVVAKSEDGNSSLASVPLLNPTAGDSSSSPSEASTPRNI 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0153 616 PANTHER ADP,ATP CARRIER PROTEIN 1 616 - -
Ssu8g0153 616 TIGRFAM AAA: ADP/ATP carrier protein family 90 556 IPR004667 GO:0005471|GO:0006862|GO:0016021
Ssu8g0153 616 MobiDBLite consensus disorder prediction 585 616 - -
Ssu8g0153 616 PANTHER - 1 616 IPR004667 GO:0005471|GO:0006862|GO:0016021
Ssu8g0153 616 SUPERFAMILY MFS general substrate transporter 213 548 IPR036259 -
Ssu8g0153 616 Pfam TLC ATP/ADP transporter 85 556 IPR004667 GO:0005471|GO:0006862|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0153 Ssu-Chr8 2302467 2305640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0153 1 591 Organic Solute Cotransporters AT1G80300 80.296 0.0 957
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0153 K03301 - gmx:100778352 1073.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0153 8 2302467 2305640 Ssu8g0153 8 2302467 2305640 ECH
Ssu8g0153 8 2302467 2305640 Ssu4g3400 4 84597434 84600404 PCT