Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3400 aTGGACGCCGTTGTTCAAACCAGAGGCCTACTCTCTCTCCCCACCAACCCCAGAAACAGGGTTTTGCATCATTTGCACCCATCGCAGGGCCTCAAACACAGATTCCTCTCTCTAAAGCCCAAAAccctctctccctcttctctcacCACTAACGGGTTAAGATTACACCTCAAACCTAATGCCTTCGGTCCAAGGCCCAAAAACCCGTTCATCTGCCGGGCCGAggccgccgccgccgccacagATGGGCCGGGCAAGCCCGCGTTCGGAGAAGTCGAGGCGGAGAAGCCAAAGCTCTTGGGAATTGAGATCGCCACTCTGAAGAAGATTATCCCTCTGGGTATGATGTTCTTTTGCATCCTCTTCAATTACACGATTCTCCGAGACACGAAGGATGTTCTGGTTGTCACGGCCCGAGGGAGCAGTGCGGAGATTATACCGTTTCTCAAGACGTGGGTGAACCTTCCCATGGCCGTCGGGTTCATGTTGTTGTACACGAAGTTGGCCAATGTTTTGTCCAAGCAAGCACTCTTTTACACCGTGATTCTTCCGTTCATTGCTTTCTTTGGGGCCTTCGGGTTTGTTTTGTACCCTCTCAGCAACTATATTCACCCCGAGGCGTTTGCGGACAAGCTTCTCAGCACCCTCGGACCGAGGTTCCTTGGTCCCCTTGCGATCATGAGAATTTGGAGCTTCTGTTTGTTCTATGTCATGGCGGAACTGTGGGGGAGTGTGGTCATTTCTGTGCTCTTTTGGGGCTTTGCCAATCAGATAACTACTATTGAGGAAGCAAAACGGTTCTACCCACTGTTTGGACTTGGGGCCAATGTAGCCCTTGTGTTCTCTGGCCGGACTGTCAAATACTTTTCACAATTGAGGCAGAATTTAGGTCCTGGAGTTGATGGTTGGGCCATCTCTCTGAAAGGAATGATGAGCATAGTTGTGCTTATGGGGCTTGCAATCTGTTTCCTGTACTGGTGGGTGAATAATTATGTTCCTCTTCCTACACGcagcaagaagaagaagGAGAAGCCCAAAATGGGAACAATGGAGAGCTTGAAGTTCTTGGTGTCTTCGAAGTACATCAGAGATCTTGCCACTTTAGTGGTTGCTTATGGAATCAGCATCAATCTTGTTGAGGTTACGTGGAAGTCTAAGCTCAAAGCTCAGTTTCCTAGCCCCAATGAGTACTCTTCTTTTATGGGTGACTTCTCCACTGCAACTGGAATTGCCACATTCACAATGATGCTTGTCAGCCAATTTATATTTGACAAATATGGATGGGGAGTTGCTGCCACCATCACCCCTACGGTCCTGCTTTTGACAGGAGTtggtttcttttctcttctgtTGTTTGGGGCCCCGCTTGCACCTGCTCTTGCGCAGTTTGGAATGACTCCACTACTAGCAGCTGTGTATGTGGGTGCCATGCAGAACATATTTAGCAAAAGTGCCAAGTACAGCTTATTTGATCCCTGCAAAGAAATGGCCTACATACCATTGGATGAGGATACCAAGGTTAAAGGGAAGGCAGCCATTGATGTTGTGTGCAACCCATTGGGGAAGTCTGGAGGTGCCCTTATTCAGCAATTTATGATCTTAACTTTTGGGTCACTAGCGAATTCAACCCCATACCTGGGAGGAGTGCTTCTGCTGATTGTTTCTGCCTGGCTAGCAGCAGCCAAATCCTTGGATACCCAGTTTACTGAATTGCGTAAAGAGGAAGAACTTGAGAAAGAAATGGAAAGAGCAGCTGCTGTTAAGATACCAGTGGTGGCTGAGAATGAGGGTGGAAATGGTTCTCTTGCAACTGGTTCACCATTAAATCCAGCCTCAGGTGACTCCTCAAGTAGTCCATCTGAAGCCTCAAGTCCTCGCAATGTTTAA 1887 0.4616 MDAVVQTRGLLSLPTNPRNRVLHHLHPSQGLKHRFLSLKPKTLSPSSLTTNGLRLHLKPNAFGPRPKNPFICRAEAAAAATDGPGKPAFGEVEAEKPKLLGIEIATLKKIIPLGMMFFCILFNYTILRDTKDVLVVTARGSSAEIIPFLKTWVNLPMAVGFMLLYTKLANVLSKQALFYTVILPFIAFFGAFGFVLYPLSNYIHPEAFADKLLSTLGPRFLGPLAIMRIWSFCLFYVMAELWGSVVISVLFWGFANQITTIEEAKRFYPLFGLGANVALVFSGRTVKYFSQLRQNLGPGVDGWAISLKGMMSIVVLMGLAICFLYWWVNNYVPLPTRSKKKKEKPKMGTMESLKFLVSSKYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSSFMGDFSTATGIATFTMMLVSQFIFDKYGWGVAATITPTVLLLTGVGFFSLLLFGAPLAPALAQFGMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGVLLLIVSAWLAAAKSLDTQFTELRKEEELEKEMERAAAVKIPVVAENEGGNGSLATGSPLNPASGDSSSSPSEASSPRNV 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3400 628 SUPERFAMILY MFS general substrate transporter 110 559 IPR036259 -
Ssu4g3400 628 TIGRFAM AAA: ADP/ATP carrier protein family 102 568 IPR004667 GO:0005471|GO:0006862|GO:0016021
Ssu4g3400 628 MobiDBLite consensus disorder prediction 597 628 - -
Ssu4g3400 628 Pfam TLC ATP/ADP transporter 96 568 IPR004667 GO:0005471|GO:0006862|GO:0016021
Ssu4g3400 628 PANTHER ADP,ATP CARRIER PROTEIN 2, CHLOROPLASTIC 1 602 - -
Ssu4g3400 628 MobiDBLite consensus disorder prediction 599 628 - -
Ssu4g3400 628 PANTHER - 1 602 IPR004667 GO:0005471|GO:0006862|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3400 Ssu-Chr4 84597434 84600404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3400 1 603 Organic Solute Cotransporters AT1G80300 78.768 0.0 949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3400 K03301 - gmx:100793284 1058.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3400 4 84597434 84600404 Ssu4g3400 4 84597434 84600404 ECH
Ssu8g0153 8 2302467 2305640 Ssu4g3400 4 84597434 84600404 PCT