Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0152 ATGATGGCGAGGGGAGGGCAGTGCTTCGAGAAGCTTCGGAGGTTCGGTCGGACGGTTTTCTTCGTGGCGGCACTGGTGGCGTCTCTGCTCGTGACGTCGCTGCCGGTGCTCGTCGCGGTCGTCGACGTGCTCGTGCCGTGCGTTTTGATTTCCAGCTTCACGTGCGTCAAGTGCTACGGCTTCAGCGAGCATTTGCGTCGCTACGCTTTCAAGAGCTCCTTGACGGATATTCCTCTCGTTTCAGTCATAAGATCCTTCATCATTATCCTTGTTTATTCCATTTGTGATGGCCCCGCTCTTTCACATGGTCCTTACCTTGGAACTGTGACTCTGTCTTCCTTCATCTCAATTGTTCTCCTTTCAGTCAAAGCTTGTGTTTTCACAGTAAATTCCCAGATTGAAGCAGAGGCTACAGTTTCCCCTACAAGGAAGAGACTCCATTTAAAGAAGTCATGGGGAATGCCTGTCTTATTTCTCTCGTCAGTTGTGTTTGCTCTTGGCCATACTGTGGTTGCTTATAGAACCAGCTGCAGAGCAAAGAGGAAGATCTTGTTTCATCGAGTTGACCCTGAGGCGGTCCTTTCATGCAAAAATGTTTTCTCTGGCTATCAGAAGGTCCCTCGGTCTCCTGTTCCCTCTGAGGGGAGAACCCCAAAAAGTGACAGTGAAATGAAACGGAGGCCTTTTGGAGCAGCTCATGATGAAGAACTGCCAATCAGATTACTTGCAGACTCGGAGAGCTTATTCATCCCCTGCCAAGGTCTTACTCTTCATTACAAGCTCAGCCTGCCTGGTTCACCTCCACTTAACATGTCCTCAACATTTTGCTGCTCTTCATCAATGGCTGGGGGGTTGTCAAAGTTTAATAGACATTTGACGTGCATATCTCCAAAAATCCATCGGCAACTCTACAGGAGCTATAGCAATCAATTCCATGGCTCATCTTTATATGCTCCTCTTTTAGATGTTCCAGTGACTTCTCCCCATCTTACTGAAGATATCCCCGTTTTGCATCTAGATGAAATTCATGAAGATGAGGAAACAATTAAATTAGCGTCTTTGTCTTTGGACCAAAATTTAGAGGATATTGGCCAAGTAGGTATTGTTTTAATACACGGGTTTGGTGGAGGCGTCTTCTCTTGGCGACAGGTAATGGGACCTCTAGCTCGGCAGAGTAATTGCACAGTTGCTGCATTTGATAGGCCTGGTTGGGGATTGACTTCAAGACTGAGTAGGGAGGATTGGGAGAAAAAAGAACTGCCTAATCCTTATAAACTTGAAAGTCAGGTTGATATGCTTTTGTCTTTCTGTTCTGAGATTGGATTTTCTTCAGTTGTGCTAATTGGTCATGATGATGGAGGGTTGCTTGCTCTGATGGCTGCACAGAGAGTTCAAACATCAATGAATTCTTTCAATGTTACAGTGAAAGGGGTTGTATTGTTGAATGTTAGCTTGTCGAGGGAAGTAGTTCCTTCATTTGCTAGAATCCTTCTGCATACTTCACTTGGAAAGAAACATTTGGTTCGTCCACTACTAAGAACAGAAATCACCCACGTGGTGAATCGGCGTTCATGGTACGATGCTACCAAACTGACAACAGAAGTTTTGACTCTCTATAAGgCTCCACTATATGTAGAAGGATGGGATGAAGCACTTCATGAGATTGGTAAATTGTCATCTGAAACCATCCTTTCAGCAAAAAATGCAGACTCGTTGCTACAAGCTGTAAAAGACATTCCAGTGTTGGTCATAGCTGGTGCTGAAGATTCACTCGTCTCGATGAAATATTGTCAAGCAATGGCCTCCAAATTTGTAAATTCTAGACTGGTTGCAATATCCGGATGTGGCCATCTACCCCACGAGGAGTGTCCAAAGGCGTTGCTTGCGGCTATATCACCCTTCATTAATAAACTCTTCTCTGTATATAACTCGCAAAGCCAATAG 1944 0.4501 MMARGGQCFEKLRRFGRTVFFVAALVASLLVTSLPVLVAVVDVLVPCVLISSFTCVKCYGFSEHLRRYAFKSSLTDIPLVSVIRSFIIILVYSICDGPALSHGPYLGTVTLSSFISIVLLSVKACVFTVNSQIEAEATVSPTRKRLHLKKSWGMPVLFLSSVVFALGHTVVAYRTSCRAKRKILFHRVDPEAVLSCKNVFSGYQKVPRSPVPSEGRTPKSDSEMKRRPFGAAHDEELPIRLLADSESLFIPCQGLTLHYKLSLPGSPPLNMSSTFCCSSSMAGGLSKFNRHLTCISPKIHRQLYRSYSNQFHGSSLYAPLLDVPVTSPHLTEDIPVLHLDEIHEDEETIKLASLSLDQNLEDIGQVGIVLIHGFGGGVFSWRQVMGPLARQSNCTVAAFDRPGWGLTSRLSREDWEKKELPNPYKLESQVDMLLSFCSEIGFSSVVLIGHDDGGLLALMAAQRVQTSMNSFNVTVKGVVLLNVSLSREVVPSFARILLHTSLGKKHLVRPLLRTEITHVVNRRSWYDATKLTTEVLTLYKAPLYVEGWDEALHEIGKLSSETILSAKNADSLLQAVKDIPVLVIAGAEDSLVSMKYCQAMASKFVNSRLVAISGCGHLPHEECPKALLAAISPFINKLFSVYNSQSQ 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0152 647 MobiDBLite consensus disorder prediction 207 229 - -
Ssu8g0152 647 Pfam Alpha/beta hydrolase family 368 629 IPR000073 -
Ssu8g0152 647 SUPERFAMILY alpha/beta-Hydrolases 368 637 IPR029058 -
Ssu8g0152 647 PANTHER ALPHA/BETA FOLD HYDROLASE 3 645 - -
Ssu8g0152 647 Pfam Cholesterol-capturing domain 61 132 IPR019498 -
Ssu8g0152 647 Gene3D alpha/beta hydrolase 359 639 IPR029058 -
Ssu8g0152 647 PRINTS Epoxide hydrolase signature 612 634 IPR000639 GO:0003824
Ssu8g0152 647 PRINTS Epoxide hydrolase signature 372 390 IPR000639 GO:0003824
Ssu8g0152 647 PRINTS Epoxide hydrolase signature 447 460 IPR000639 GO:0003824
Ssu8g0152 647 PRINTS Epoxide hydrolase signature 579 595 IPR000639 GO:0003824
Ssu8g0152 647 PANTHER HYDROLASE 3 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0152 Ssu-Chr8 2239084 2243817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0152 2 638 Miscellaneous Gene Families AT1G80280 63.889 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0152 - - gmx:100778891 1129.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0152 8 2239084 2243817 Ssu4g3402 4 84622520 84626634 PCT