Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3402 ATGGCGAAGGGAGGGCAATGCTTCTTCGAGAAGCTTCGGAGGTGCGTTTGGACGGTTTTCTTCGTGGTGGCGTTGGTGGCGTCGCTGGCGGTGACGTCGCTGCCGGTGGTCGTCGCGGTGGTCGACGTGTTGGTGCCGTGCGTTTTGATCTCGAACTTCACTTGCGTCAAGTGTTACAGCATCAAGGAGCATTTTCACCGTTACGCTTTCAAGAGTTCCTTGACAGATATTCCTCTCGTTTCCGTCTTAAGATCCCTTATCATTCTCTGTGTTTATTCCGTTTGTGATGGTCCTGCTCTCTCACATGGTCCGTACCTTGGAACTGTGACTCTGTGCTCCTTGCTGTCCATTGTTCTCCTTTCGGTCAAAGCTTGTGTTTTCACTGTAAATTCCCATATTGAAGCGGAGGCTTTGGTTTCCCTCAGGAAGCAGAGACTCCATTTGAAGAAGCCATGGGGAATGCCTGTCTTGTTTCTTTCGTCAGTTGTGTTTGCCCTTGGCCATACTGTGGTTGCTTATAGAACCAGCTGCAGAGCACGCAGAAAGCTCTTGTTACATCGAGTTGACCCTGAAGCTGTCCTATCGTGCAAAAATGTTTTCTCTGGCTATCCAAAGGTCCCACGCTCTCCAACTCCTTCTGTTGGGAGAACCCCCAAAAGTGACTGTGAGATGAGGCGGAGACCTTTTGGGACAGCTCGTGATGAAGAACTGCTTGTCAGATTACTTGCAAACTCGGACAGCTTATTCATTACATGCCAAGGACTTACACTCCATTACAAGCTCAGCTTGCCCGGTTCACCTCCACATACGTTGTCTTCAATGTCCTGCATTGAGTCCAATTCTAGTTGCGCCACTTCATCAATGGCTGCAGGGTTGGCAAATTCTAATAAACATTTGCTAAGTACATCTCCAAATATCCAACCACAGCTTTACAGAAGCTATAGCAATCAATTCCATGGCTCATCTCTACATGTTCCTCTATTGGATAGTCCTGTAACTTCTATTATTTCTGAAGATATCCCTGTTTTTCACCTAGATGGTATTTGTGAAGAAGATGAAACTAATAAATTGGATTTTCAATCTCTGGAGCTAGATTTACAGAGTACTGACCAATTAGGTACTGTTTTAATACATGGGTTTGGTGGAGGAGTCTTCTCTTGGAGGCATGTGATGGGATCTCTAGCTCGGCAGAGTAATTGCACAGTTGCCGCATTTGATAGGCCTGGTTGGGGATTAAGTTCAAGGCCTCGCCAGGAGGACTGGGAGGAAAAAGAGTTGCCTAATCCTTATAAGCTTGAAAGTCAGGTTGATCTGCTTTTATCATTCTGTTCTGAGATTGGATTTTCTTCAGTGGTGCTAATCGGTCATGATGATGGAGGGTTGCTTGCCCTGATGGCTGCACAAAGAATTCATACATCAATGAATTATTTCAATGTTAATGTGAAAGGGGTTGTATTGCTAAATGTTAGCTTGTCGAGGGAAGTGATTCCATCCTTTGCAAGAATCCTTCTGCATACCTCACTTGGAAAGAAGCATTTGGTTCGTCCTCTACTAAGAGCAGAAATCACCCAGGTGGTGAATCGGCGTGCTTGGTACGATTCTACCAAAATGACACCAGAAGTTTTGACTCTCTATAAGGCTCCACTATCTGTTGAAGGATGGGATGACGCACTTCATGAGATTGGTAAATTGTCATCTGAAACCATCCTTTCAGCTAAAAACGCAGAATCATTGTTACAAGCTGTAGGAGACGTTCCAGTGTTAGTCATTGCAGGTGCTGAAGATTCCCTCGTCTCTTTGAAATCTTGTCAAGCTATGGCCTCAAAACTTGTCAATTCTAGATTGGTTGCCATATCTGGATGTGGCCATTTACCCCATGAAGAGTGTCCGAAGGCATTGCTTGCAGCTATATTACCCTTCATCAGTAGACTCCTGTCTGCATCTGACTCGCAAAGCCAataa 1962 0.4526 MAKGGQCFFEKLRRCVWTVFFVVALVASLAVTSLPVVVAVVDVLVPCVLISNFTCVKCYSIKEHFHRYAFKSSLTDIPLVSVLRSLIILCVYSVCDGPALSHGPYLGTVTLCSLLSIVLLSVKACVFTVNSHIEAEALVSLRKQRLHLKKPWGMPVLFLSSVVFALGHTVVAYRTSCRARRKLLLHRVDPEAVLSCKNVFSGYPKVPRSPTPSVGRTPKSDCEMRRRPFGTARDEELLVRLLANSDSLFITCQGLTLHYKLSLPGSPPHTLSSMSCIESNSSCATSSMAAGLANSNKHLLSTSPNIQPQLYRSYSNQFHGSSLHVPLLDSPVTSIISEDIPVFHLDGICEEDETNKLDFQSLELDLQSTDQLGTVLIHGFGGGVFSWRHVMGSLARQSNCTVAAFDRPGWGLSSRPRQEDWEEKELPNPYKLESQVDLLLSFCSEIGFSSVVLIGHDDGGLLALMAAQRIHTSMNYFNVNVKGVVLLNVSLSREVIPSFARILLHTSLGKKHLVRPLLRAEITQVVNRRAWYDSTKMTPEVLTLYKAPLSVEGWDDALHEIGKLSSETILSAKNAESLLQAVGDVPVLVIAGAEDSLVSLKSCQAMASKLVNSRLVAISGCGHLPHEECPKALLAAILPFISRLLSASDSQSQ 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3402 653 Pfam Alpha/beta hydrolase family 375 635 IPR000073 -
Ssu4g3402 653 SUPERFAMILY alpha/beta-Hydrolases 375 643 IPR029058 -
Ssu4g3402 653 PRINTS Epoxide hydrolase signature 618 640 IPR000639 GO:0003824
Ssu4g3402 653 PRINTS Epoxide hydrolase signature 453 466 IPR000639 GO:0003824
Ssu4g3402 653 PRINTS Epoxide hydrolase signature 378 396 IPR000639 GO:0003824
Ssu4g3402 653 PRINTS Epoxide hydrolase signature 585 601 IPR000639 GO:0003824
Ssu4g3402 653 PANTHER ALPHA/BETA FOLD HYDROLASE 3 648 - -
Ssu4g3402 653 Gene3D alpha/beta hydrolase 365 646 IPR029058 -
Ssu4g3402 653 PANTHER HYDROLASE 3 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3402 Ssu-Chr4 84622520 84626634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3402 5 649 Miscellaneous Gene Families AT1G80280 63.429 0.0 781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3402 - - gmx:100778209 1141.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3402 4 84622520 84626634 Ssu4g3402 4 84622520 84626634 ECH
Ssu8g0152 8 2239084 2243817 Ssu4g3402 4 84622520 84626634 PCT