Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0148 ATGTGGCGGAGAGTGTTGTCTTCTTCTCACCTCCTCAAAATCAAATCCCTACACACAGCACTCTCTTCTTCTCATCCCCGATTCGCCGCCCCTCTCGTCACCCGCCACGTCACCGCCCAATCAGGTGCTTCCGTCAAAAAGAGGGTCGAAGATGTCATGCCAATTGCTACCGGCCACGAGCGTGAGGAGATACATGCCGAGCTTGAGgGAAGGGATATTCTTGAAATTAACCATCCTGTAGGCCCCTTCGGCACAAAGGAAGCACCTGCTGTTGTTAAATCTTACTTTGACAGAAGGATAGTTGGATGCCCAGGAGGTGAAGGCGAAGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGGCAAGCCTTATGAATGTCCAGTGTGCTCACAGTATTTTGAGCTGAAAGTGGTCGGACCTGGCGGTGACCCTTATGGACATGGCGATCACGATCACCATTGA 465 0.5097 MWRRVLSSSHLLKIKSLHTALSSSHPRFAAPLVTRHVTAQSGASVKKRVEDVMPIATGHEREEIHAELEGRDILEINHPVGPFGTKEAPAVVKSYFDRRIVGCPGGEGEDEHDVVWFWLEKGKPYECPVCSQYFELKVVGPGGDPYGHGDHDHH 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0148 154 SUPERFAMILY Rubredoxin-like 45 142 - -
Ssu8g0148 154 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL 1 154 IPR002124 GO:0005740|GO:0005751|GO:0006123
Ssu8g0148 154 CDD Cyt_c_Oxidase_Vb 44 141 IPR002124 GO:0005740|GO:0005751|GO:0006123
Ssu8g0148 154 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B 1 154 - -
Ssu8g0148 154 Pfam Cytochrome c oxidase subunit Vb 55 144 IPR002124 GO:0005740|GO:0005751|GO:0006123
Ssu8g0148 154 Gene3D Cytochrome c oxidase, subunit Vb 45 139 IPR036972 GO:0005740|GO:0005751|GO:0006123
Ssu8g0148 154 ProSiteProfiles Cytochrome c oxidase subunit Vb, zinc binding domain profile. 43 143 IPR002124 GO:0005740|GO:0005751|GO:0006123
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0148 Ssu-Chr8 2153989 2156749 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0148 K02265 - gmx:100801050 240.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0148 8 2153989 2156749 Ssu8g0148 8 2153989 2156749 ECH
Ssu8g0148 8 2153989 2156749 Ssu4g3406 4 84677579 84688297 PCT