Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0136 ATGGCTGGTCTTCAAAGATCTGCAGTGTCCTTCAGGAGACAGGGTTCATCAGGGTTTGTTTGGGATGATAGGTTCTTGTCAGAGGAATTGAACAAAGTGAAGGAAGAGCAAGACAAGGACGAGATTAAAGAGCTCCAACCAACGCCGCCCCTCGACAGAAGCCGCTCCAACGGCGGAGCCCGGGGCTACCGCACCGGAAAAGTTTTGCCGGCGATAGAGCCGCCGTCTCCCAGACTCTCTGCATGCGGCTTTTGCGGCGCCTTTGCAAAAGCGGCGGACAACAAGGGCCAACGGACTAAACCCGCCAAGCATCGACCGAGGTAG 324 0.5617 MAGLQRSAVSFRRQGSSGFVWDDRFLSEELNKVKEEQDKDEIKELQPTPPLDRSRSNGGARGYRTGKVLPAIEPPSPRLSACGFCGAFAKAADNKGQRTKPAKHRPR 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0136 107 MobiDBLite consensus disorder prediction 32 48 - -
Ssu8g0136 107 MobiDBLite consensus disorder prediction 32 72 - -
Ssu8g0136 107 Pfam Domain of unknown function (DUF4666) 1 95 IPR031421 -
Ssu8g0136 107 PANTHER - 1 102 - -
Ssu8g0136 107 PANTHER OS05G0542732 PROTEIN-RELATED 1 102 IPR031421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0136 Ssu-Chr8 2059107 2059430 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0136 - - gmx:100783364 174.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0136 8 2059107 2059430 Ssu4g3418 4 84780348 84780680 PCT