Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3418 aTGGCTGGTCTGCAAAGATCTGCGGTGTCTTTCAGGAGACAGGGTTCATCAGGGTTTGTTTGGGACGACAAGTTATTGTCAGGGGAATTGACCAAAGTGAACAACGACCAACAACAGGGTCACCAAGACCAAAAGGGTAAACTTAACGCAAGAACACCACCACCCGCAACCGTCCAGAGAAGCCGCTCCAACGGCGGCTACCGCACCGGAAAAGTCTCGCCGGCGATCGAGCCTCCCTCTCCCAAGCTCTCTGCTTGCGGCCTCTGCAGCGCTTTTGGAAAAACAGGGGAGAAGGGTCGACGCGCAAAGCCCCTTAAACATCGATCCAGGTAG 333 0.5495 MAGLQRSAVSFRRQGSSGFVWDDKLLSGELTKVNNDQQQGHQDQKGKLNARTPPPATVQRSRSNGGYRTGKVSPAIEPPSPKLSACGLCSAFGKTGEKGRRAKPLKHRSR 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3418 110 MobiDBLite consensus disorder prediction 91 110 - -
Ssu4g3418 110 Pfam Domain of unknown function (DUF4666) 1 98 IPR031421 -
Ssu4g3418 110 PANTHER - 1 107 - -
Ssu4g3418 110 MobiDBLite consensus disorder prediction 31 46 - -
Ssu4g3418 110 PANTHER OS05G0542732 PROTEIN-RELATED 1 107 IPR031421 -
Ssu4g3418 110 MobiDBLite consensus disorder prediction 31 80 - -
Ssu4g3418 110 MobiDBLite consensus disorder prediction 54 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3418 Ssu-Chr4 84780348 84780680 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3418 - - gmx:100807604 160.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0136 8 2059107 2059430 Ssu4g3418 4 84780348 84780680 PCT