Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0113 ATGAAGGAAAAGTATTGCATCATCCTGAGGATTGCTTATCATTTTTTGCTAATGACGTTACCCTTATTGAATTACATAACACAACCAATTTTAGGGGATAAAGCATTTACTGGAACATATGGAGTGAACTATGGTAGGATAGCTGACAATCTGCCTCCACCAGAAAGCGTGGTTACCCTACTCAAATCAGCAAAAATTAAGAACATTAGGATATATGATGCTGATCATCAAGTCCTGCGTGCGTTCAAAGGGTCTGGAATTGAAATTATAGTTGGACTTGGCAATGAATTTCTGAAGGACATAAGTGTGGGGGAGGATAGAGCCATGAGTTGGGTCAAAGAAAATGTCCAGCAATTTCTTCCAGGAACCAGAATTAGCGGAATTGCGGTGGGAAATGAAATATTGGGAGGCACGGATATGGAGCTCTGGGAAGTTTTGGTGCCTGCAGTAAAGAATGTTTACAATGTCCTTAGTAAGCTTGGTCTAGCAAATGATGTTCAGGTGTCAAGTCCACATTCTGAGGCTGTATTTGCTAATTCCTTTCCTCCATCCTCATGCACTTTTAAGGAAGATGTCCTTCCATATATGAAGCCTCTCTTGCAATTCTTCTCACAGATTGGCACTCCCTTCTTCATAAATGCATATCCCTTCCTTGCCTATAAGAATGATCCACAACATATTGACCTTAACTATGCCCTCTTCCTAAAAAGTAATGGGATATATGATGCAAAGACTAAACTGCATTATAGTAACATGTTTGAGGCTCAGGTTGATGCAGCTTATGCTGCCTTGGAGAAGGTTGGGTTTGACAAGATGGAGGTTATTGTTTCTGAGACTGGGTGGGCTTCTCATGGGGACGAGAATGAAGCTGGAGcaacaataaaaaatgcaagGACCTACAATCTTAATTTGCGTAAGCGATTGCTCAAGAACAAAGGGACCCCTTACAGGCCCAAACAAGAGGTGAGGGCTTTTATCTTTGCTTTGTTTAATGAGAATTTGAAGCCTGGCCCAACGTCCGAGAGAAACTTTGGATTGTTTAAGGCTGATGGAAGCATTGCATATGATATTGGCTTCACTGGACTTGTACCTTCTTCAGCAACTTCATCTTTCCTTTCCTTAAAGAAAACTTGCTATTGCACTCTTGAAATCTTTCTTGTTCCAGTGCGCACCTCTAAAGTCCCTATTCCTTTCAATTCGGGGAGACTTATTGAGTTGCACTATAGAACCTTGGCGATTAGAGGTCAATTGAAGTGA 1257 0.4081 MKEKYCIILRIAYHFLLMTLPLLNYITQPILGDKAFTGTYGVNYGRIADNLPPPESVVTLLKSAKIKNIRIYDADHQVLRAFKGSGIEIIVGLGNEFLKDISVGEDRAMSWVKENVQQFLPGTRISGIAVGNEILGGTDMELWEVLVPAVKNVYNVLSKLGLANDVQVSSPHSEAVFANSFPPSSCTFKEDVLPYMKPLLQFFSQIGTPFFINAYPFLAYKNDPQHIDLNYALFLKSNGIYDAKTKLHYSNMFEAQVDAAYAALEKVGFDKMEVIVSETGWASHGDENEAGATIKNARTYNLNLRKRLLKNKGTPYRPKQEVRAFIFALFNENLKPGPTSERNFGLFKADGSIAYDIGFTGLVPSSATSSFLSLKKTCYCTLEIFLVPVRTSKVPIPFNSGRLIELHYRTLAIRGQLK 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0113 418 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 20 381 IPR044965 GO:0004553|GO:0005975
Ssu8g0113 418 PANTHER GLYCOSYL HYDROLASE SUPERFAMILY PROTEIN 20 381 - -
Ssu8g0113 418 Pfam Glycosyl hydrolases family 17 41 359 IPR000490 GO:0004553|GO:0005975
Ssu8g0113 418 Gene3D Glycosidases 39 362 - -
Ssu8g0113 418 SUPERFAMILY (Trans)glycosidases 40 358 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0113 Ssu-Chr8 1836213 1838110 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0113 5 368 Glycoside Hydrolase AT3G15800 71.081 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0113 - - gmx:100815468 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0113 8 1836213 1838110 Ssu8g0113 8 1836213 1838110 ECH
Ssu8g0113 8 1836213 1838110 Ssu4g3437 4 85005957 85007665 PCT